Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004579674.1 |
| length | 953 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 3 |
| gene id | LOC117599221 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 21583715 ~ 21586639 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU306366 | lncRNA | downstream | 28255 | 21514647 ~ 21555460 (-) | True | G258771 |
| TU306289 | lncRNA | downstream | 208612 | 21374898 ~ 21375103 (-) | True | G258700 |
| TU306265 | lncRNA | downstream | 229028 | 21354439 ~ 21354687 (-) | True | trnaq-uug_7 |
| TU306206 | lncRNA | downstream | 342655 | 21238036 ~ 21241060 (-) | True | G258626 |
| TU306176 | lncRNA | downstream | 416117 | 21153906 ~ 21167598 (-) | True | G258596 |
| XR_003403152.2 | lncRNA | upstream | 1790 | 21588429 ~ 21599129 (-) | True | LOC113530427 |
| TU306559 | lncRNA | upstream | 163152 | 21749791 ~ 21750001 (-) | True | G258940 |
| TU306562 | lncRNA | upstream | 164766 | 21751405 ~ 21752452 (-) | True | G258942 |
| TU306582 | lncRNA | upstream | 212197 | 21798836 ~ 21799244 (-) | True | G258961 |
| TU306588 | lncRNA | upstream | 218457 | 21805096 ~ 21806760 (-) | True | G258966 |
| XM_034312021.1 | mRNA | downstream | 87660 | 21494416 ~ 21496055 (-) | True | LOC117599277 |
| XM_034311891.1 | mRNA | downstream | 108873 | 21472718 ~ 21474842 (-) | True | LOC117599258 |
| XM_026920132.2 | mRNA | downstream | 279087 | 21297056 ~ 21304628 (-) | True | ednrab |
| XM_026921046.2 | mRNA | downstream | 288942 | 21287614 ~ 21294773 (-) | True | LOC113530756 |
| XM_026921215.2 | mRNA | downstream | 310704 | 21259533 ~ 21273011 (-) | True | wu:fy63c09 |
| XM_026920092.2 | mRNA | upstream | 41493 | 21628132 ~ 21671352 (-) | True | LOC113530264 |
| XM_026920093.2 | mRNA | upstream | 44754 | 21631393 ~ 21671352 (-) | False | LOC113530264 |
| XM_026920917.2 | mRNA | upstream | 242626 | 21829265 ~ 21835197 (-) | True | ftr92 |
| XM_034312131.1 | mRNA | upstream | 271573 | 21858212 ~ 21883246 (-) | True | gpsm2l |
| XM_026920925.2 | mRNA | upstream | 298026 | 21884665 ~ 21921592 (-) | True | ghrhrl |
| trnaq-uug_7 | other | downstream | 229018 | 21354626 ~ 21354697 (-) | False | trnaq-uug_7 |
| TU306159 | other | downstream | 414017 | 21168986 ~ 21169698 (-) | True | G258580 |
| TU305957 | other | downstream | 715757 | 20830828 ~ 20867958 (-) | False | LOC117599256 |
| TU305550 | other | downstream | 1311808 | 20252170 ~ 20271907 (-) | True | G258077 |
| XR_004579656.1 | other | downstream | 1463766 | 20110463 ~ 20119949 (-) | False | mlh3 |
| XR_004579748.1 | other | upstream | 342536 | 21929175 ~ 21954605 (-) | False | fyco1a |
| TU306971 | other | upstream | 859391 | 22446030 ~ 22449427 (-) | True | G259306 |
| XR_004579695.1 | other | upstream | 1611943 | 23198582 ~ 23240346 (-) | False | LOC113530288 |
| TU308180 | other | upstream | 2177035 | 23763674 ~ 23764163 (-) | True | G260310 |
| XR_004579755.1 | other | upstream | 2915094 | 24501733 ~ 24508467 (-) | False | tent5ab |
