Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004579680.1 |
| length | 162 |
| RNA type | ncRNA |
| GC content | 0.44 |
| exon number | 3 |
| gene id | LOC117599224 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047610.1 |
| NCBI id | CM018556.1 |
| chromosome length | 25111544 |
| location | 17676565 ~ 17695598 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU303656 | lncRNA | downstream | 304 | 17673279 ~ 17676261 (-) | True | G256578 |
| XR_004579716.1 | lncRNA | downstream | 6936 | 17666668 ~ 17669629 (-) | True | LOC117599248 |
| TU303646 | lncRNA | downstream | 48104 | 17626319 ~ 17628461 (-) | True | G256569 |
| TU303643 | lncRNA | downstream | 48104 | 17626554 ~ 17628461 (-) | False | G256569 |
| TU303641 | lncRNA | downstream | 53143 | 17623185 ~ 17623422 (-) | True | G256567 |
| TU303681 | lncRNA | upstream | 3600 | 17699198 ~ 17699397 (-) | True | G256598 |
| TU303696 | lncRNA | upstream | 26125 | 17721723 ~ 17721933 (-) | True | G256613 |
| TU303705 | lncRNA | upstream | 36499 | 17732097 ~ 17732463 (-) | True | G256622 |
| TU303706 | lncRNA | upstream | 38208 | 17733806 ~ 17734049 (-) | True | G256623 |
| TU303780 | lncRNA | upstream | 95043 | 17790641 ~ 17790907 (-) | True | G256689 |
| XM_034311879.1 | mRNA | downstream | 449831 | 17208885 ~ 17226734 (-) | True | LOC113530577 |
| XM_026920775.2 | mRNA | downstream | 505546 | 17125019 ~ 17171019 (-) | False | rapgef3 |
| XM_026920776.2 | mRNA | downstream | 516231 | 17125019 ~ 17160334 (-) | False | rapgef3 |
| XM_026920774.2 | mRNA | downstream | 516232 | 17125019 ~ 17160333 (-) | True | rapgef3 |
| XM_026920854.2 | mRNA | downstream | 805401 | 16852928 ~ 16871164 (-) | True | dazap2 |
| XM_026920713.2 | mRNA | upstream | 35114 | 17730712 ~ 17735744 (-) | True | LOC113530575 |
| XM_026920241.2 | mRNA | upstream | 51684 | 17747282 ~ 17754344 (-) | True | taf8 |
| XM_026921214.2 | mRNA | upstream | 59994 | 17755592 ~ 17756555 (-) | True | g0s2 |
| XM_026920975.2 | mRNA | upstream | 70611 | 17766209 ~ 17778850 (-) | False | camk1gb |
| XM_026920974.2 | mRNA | upstream | 70611 | 17766209 ~ 17778675 (-) | True | camk1gb |
| XR_004579669.1 | other | downstream | 845306 | 16813384 ~ 16831259 (-) | False | si:ch211-210c8.6 |
| XR_003403156.2 | other | downstream | 981535 | 16647823 ~ 16695030 (-) | False | fam50a |
| TU302676 | other | downstream | 1856411 | 15715035 ~ 15820154 (-) | False | znf512b |
| XR_003403204.1 | other | downstream | 2188706 | 15487757 ~ 15487859 (-) | True | LOC113530990 |
| TU301948 | other | downstream | 2972295 | 14699272 ~ 14704270 (-) | False | G255071 |
| TU303855 | other | upstream | 197483 | 17893081 ~ 17913277 (-) | False | kcng1 |
| XR_004579746.1 | other | upstream | 589888 | 18285486 ~ 18300687 (-) | False | znf217 |
| TU304189 | other | upstream | 813557 | 18509155 ~ 18513257 (-) | False | LOC113530839 |
| XR_004579689.1 | other | upstream | 1242312 | 18937910 ~ 19064582 (-) | False | lrp1ab |
| trnak-uuu_17 | other | upstream | 1432866 | 19128464 ~ 19128536 (-) | True | trnak-uuu_17 |
