Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU309212 |
| length | 401 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 2 |
| gene id | G261024 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 135419 ~ 135936 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU309206 | lncRNA | upstream | 2277 | 129140 ~ 133142 (+) | True | G261018 |
| TU309210 | lncRNA | upstream | 3147 | 131556 ~ 132272 (+) | True | G261022 |
| TU309189 | lncRNA | upstream | 22787 | 110977 ~ 112632 (+) | True | G261008 |
| TU309176 | lncRNA | upstream | 80770 | 52397 ~ 54649 (+) | False | LOC117599401 |
| TU309222 | lncRNA | downstream | 3354 | 139290 ~ 141543 (+) | True | G261031 |
| TU309225 | lncRNA | downstream | 8465 | 144401 ~ 144867 (+) | True | G261034 |
| TU309249 | lncRNA | downstream | 43804 | 179740 ~ 278637 (+) | True | G261044 |
| TU309255 | lncRNA | downstream | 48050 | 183986 ~ 184469 (+) | True | G261048 |
| TU309264 | lncRNA | downstream | 59731 | 195667 ~ 253441 (+) | True | G261056 |
| XM_034312776.1 | mRNA | upstream | 30630 | 97689 ~ 104789 (+) | True | wdr74 |
| XM_026912069.2 | mRNA | upstream | 66031 | 66588 ~ 69388 (+) | True | znhit2 |
| XM_026912073.2 | mRNA | upstream | 69129 | 63779 ~ 66290 (+) | True | mrpl49 |
| XM_034312780.1 | mRNA | downstream | 90428 | 226364 ~ 245418 (+) | True | LOC113538163 |
| XM_034312333.1 | mRNA | downstream | 119010 | 254946 ~ 266773 (+) | False | fgf13b |
| XM_026933139.2 | mRNA | downstream | 119010 | 254946 ~ 266082 (+) | False | fgf13b |
| XM_026933041.2 | mRNA | downstream | 205735 | 341671 ~ 351928 (+) | True | il2rga |
| XM_034312540.1 | mRNA | downstream | 292213 | 428149 ~ 436298 (+) | True | ska2 |
| TU309200 | other | upstream | 33390 | 97748 ~ 102029 (+) | False | wdr74 |
| TU309275 | other | downstream | 120690 | 256626 ~ 266760 (+) | True | fgf13b |
| XR_004579859.1 | other | downstream | 175540 | 311476 ~ 311986 (+) | True | LOC117599405 |
| TU309343 | other | downstream | 308831 | 444767 ~ 480711 (+) | True | G261104 |
| TU309389 | other | downstream | 346499 | 482435 ~ 486200 (+) | False | prdm15 |
| TU309320 | other | downstream | 371561 | 507497 ~ 512773 (+) | False | bcl7ba |
