Item | Value |
---|---|
RNA id | TU309277 |
length | 612 |
lncRNA type | inter_gene |
GC content | 0.43 |
exon number | 2 |
gene id | G261067 |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047611.1 |
NCBI id | CM018557.1 |
chromosome length | 24879021 |
location | 308084 ~ 308719 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU309278 | lncRNA | upstream | 21017 | 285248 ~ 287067 (+) | False | G261068 |
TU309249 | lncRNA | upstream | 29447 | 179740 ~ 278637 (+) | True | G261044 |
TU309264 | lncRNA | upstream | 54643 | 195667 ~ 253441 (+) | True | G261056 |
TU309272 | lncRNA | upstream | 85322 | 221220 ~ 222762 (+) | True | G261064 |
TU309255 | lncRNA | upstream | 123615 | 183986 ~ 184469 (+) | True | G261048 |
TU309305 | lncRNA | downstream | 18543 | 327262 ~ 327468 (+) | True | G261090 |
TU309311 | lncRNA | downstream | 70301 | 379020 ~ 436288 (+) | False | ska2 |
TU309317 | lncRNA | downstream | 109970 | 418689 ~ 422040 (+) | True | G261099 |
TU309346 | lncRNA | downstream | 114152 | 422871 ~ 423758 (+) | True | G261106 |
TU309384 | lncRNA | downstream | 125624 | 434343 ~ 578767 (+) | True | G261140 |
XM_034312333.1 | mRNA | upstream | 41311 | 254946 ~ 266773 (+) | False | fgf13b |
XM_026933139.2 | mRNA | upstream | 42002 | 254946 ~ 266082 (+) | False | fgf13b |
XM_034312780.1 | mRNA | upstream | 62666 | 226364 ~ 245418 (+) | True | LOC113538163 |
XM_034312776.1 | mRNA | upstream | 203295 | 97689 ~ 104789 (+) | True | wdr74 |
XM_026912069.2 | mRNA | upstream | 238696 | 66588 ~ 69388 (+) | True | znhit2 |
XM_026933041.2 | mRNA | downstream | 32952 | 341671 ~ 351928 (+) | True | il2rga |
XM_034312540.1 | mRNA | downstream | 119430 | 428149 ~ 436298 (+) | True | ska2 |
XM_034312541.1 | mRNA | downstream | 151543 | 460262 ~ 476591 (+) | True | LOC113523717 |
XM_034312781.1 | mRNA | downstream | 173669 | 482388 ~ 500186 (+) | True | prdm15 |
XM_034312901.1 | mRNA | downstream | 192503 | 501222 ~ 507099 (+) | True | tbl2 |
TU309275 | other | upstream | 41324 | 256626 ~ 266760 (+) | True | fgf13b |
TU309200 | other | upstream | 206055 | 97748 ~ 102029 (+) | False | wdr74 |
XR_004579859.1 | other | downstream | 2757 | 311476 ~ 311986 (+) | True | LOC117599405 |
TU309343 | other | downstream | 136048 | 444767 ~ 480711 (+) | True | G261104 |
TU309389 | other | downstream | 173716 | 482435 ~ 486200 (+) | False | prdm15 |
TU309320 | other | downstream | 198778 | 507497 ~ 512773 (+) | False | bcl7ba |
TU309447 | other | downstream | 417108 | 725827 ~ 727725 (+) | True | G261178 |