Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026943916.2 |
| length | 1021 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 3 |
| gene id | pcp4a |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 2795491 ~ 2817263 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU310997 | lncRNA | upstream | 3083 | 2757070 ~ 2792408 (+) | False | G262440 |
| TU311004 | lncRNA | upstream | 3780 | 2757070 ~ 2791711 (+) | False | G262440 |
| TU310996 | lncRNA | upstream | 35339 | 2756607 ~ 2760152 (+) | True | G262440 |
| TU310994 | lncRNA | upstream | 35339 | 2757912 ~ 2760152 (+) | False | G262440 |
| TU310987 | lncRNA | upstream | 48174 | 2744428 ~ 2747317 (+) | True | rps25 |
| TU311225 | lncRNA | downstream | 169212 | 2986475 ~ 2986675 (+) | True | G262637 |
| TU311260 | lncRNA | downstream | 248893 | 3066156 ~ 3067730 (+) | True | G262662 |
| TU311264 | lncRNA | downstream | 249923 | 3067186 ~ 3068928 (+) | True | G262663 |
| TU311279 | lncRNA | downstream | 323755 | 3141018 ~ 3141616 (+) | False | nrip1b |
| TU311351 | lncRNA | downstream | 372089 | 3189352 ~ 3194482 (+) | True | G262741 |
| XM_026943976.2 | mRNA | upstream | 13066 | 2767552 ~ 2782425 (+) | True | igsf5a |
| XM_034312856.1 | mRNA | upstream | 48223 | 2744396 ~ 2747268 (+) | False | rps25 |
| XM_034312657.1 | mRNA | upstream | 67073 | 2721350 ~ 2728418 (+) | True | slc37a4b |
| XM_026943763.2 | mRNA | upstream | 67073 | 2721350 ~ 2728418 (+) | False | slc37a4b |
| XM_026943904.2 | mRNA | upstream | 84378 | 2698244 ~ 2711113 (+) | False | LOC113544866 |
| XM_034312665.1 | mRNA | downstream | 213011 | 3030274 ~ 3062807 (+) | True | gdpd5a |
| XM_026943624.2 | mRNA | downstream | 213011 | 3030274 ~ 3062188 (+) | False | gdpd5a |
| XM_034312666.1 | mRNA | downstream | 213011 | 3030274 ~ 3062188 (+) | False | gdpd5a |
| XM_026943625.2 | mRNA | downstream | 213011 | 3030274 ~ 3062188 (+) | False | gdpd5a |
| XM_026943910.2 | mRNA | downstream | 298906 | 3116169 ~ 3141753 (+) | True | nrip1b |
| XR_004579857.1 | other | upstream | 448106 | 2343661 ~ 2347385 (+) | True | LOC117599403 |
| XR_004579765.1 | other | upstream | 1376002 | 1414504 ~ 1419489 (+) | False | ponzr2 |
| XR_004579764.1 | other | upstream | 1376056 | 1414504 ~ 1419435 (+) | False | ponzr2 |
| TU309863 | other | upstream | 1558359 | 1205991 ~ 1237132 (+) | True | G261503 |
| TU309774 | other | upstream | 1683213 | 1101789 ~ 1112278 (+) | True | vamp2 |
| TU312620 | other | downstream | 2260618 | 5077881 ~ 5080617 (+) | False | triap1 |
| TU313203 | other | downstream | 3191537 | 6008800 ~ 6011902 (+) | True | G264336 |
| TU313925 | other | downstream | 4249608 | 7066871 ~ 7082441 (+) | True | G264948 |
| TU313944 | other | downstream | 4298797 | 7116060 ~ 7118616 (+) | False | ddx55 |
| trnar-ccu_6 | other | downstream | 4551217 | 7368480 ~ 7368552 (+) | True | trnar-ccu_6 |
