Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU311260 |
| length | 616 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 3 |
| gene id | G262662 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 3066156 ~ 3067730 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0008144 | drug binding | molecular_function |
| GO:0019825 | oxygen binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU311225 | lncRNA | upstream | 79481 | 2986475 ~ 2986675 (+) | True | G262637 |
| TU310997 | lncRNA | upstream | 273748 | 2757070 ~ 2792408 (+) | False | G262440 |
| TU311004 | lncRNA | upstream | 274445 | 2757070 ~ 2791711 (+) | False | G262440 |
| TU310996 | lncRNA | upstream | 306004 | 2756607 ~ 2760152 (+) | True | G262440 |
| TU310994 | lncRNA | upstream | 306004 | 2757912 ~ 2760152 (+) | False | G262440 |
| TU311279 | lncRNA | downstream | 73288 | 3141018 ~ 3141616 (+) | False | nrip1b |
| TU311351 | lncRNA | downstream | 121622 | 3189352 ~ 3194482 (+) | True | G262741 |
| TU311347 | lncRNA | downstream | 122206 | 3189936 ~ 3238817 (+) | True | G262737 |
| TU311358 | lncRNA | downstream | 166832 | 3234562 ~ 3267853 (+) | True | G262747 |
| TU311380 | lncRNA | downstream | 258169 | 3325899 ~ 3328969 (+) | True | G262757 |
| XM_034312665.1 | mRNA | upstream | 3349 | 3030274 ~ 3062807 (+) | True | gdpd5a |
| XM_026943624.2 | mRNA | upstream | 3968 | 3030274 ~ 3062188 (+) | False | gdpd5a |
| XM_034312666.1 | mRNA | upstream | 3968 | 3030274 ~ 3062188 (+) | False | gdpd5a |
| XM_026943625.2 | mRNA | upstream | 3968 | 3030274 ~ 3062188 (+) | False | gdpd5a |
| XM_026943916.2 | mRNA | upstream | 248893 | 2795491 ~ 2817263 (+) | True | pcp4a |
| XM_026943910.2 | mRNA | downstream | 48439 | 3116169 ~ 3141753 (+) | True | nrip1b |
| XM_034312707.1 | mRNA | downstream | 48649 | 3116379 ~ 3141753 (+) | False | nrip1b |
| XM_026943912.2 | mRNA | downstream | 54277 | 3122007 ~ 3141753 (+) | False | nrip1b |
| XM_026943825.2 | mRNA | downstream | 82736 | 3150466 ~ 3178938 (+) | True | usp25 |
| XM_034312675.1 | mRNA | downstream | 82737 | 3150467 ~ 3178938 (+) | False | usp25 |
| TU311007 | other | upstream | 248898 | 2795548 ~ 2817258 (+) | False | pcp4a |
| XR_004579857.1 | other | upstream | 718771 | 2343661 ~ 2347385 (+) | True | LOC117599403 |
| XR_004579765.1 | other | upstream | 1646667 | 1414504 ~ 1419489 (+) | False | ponzr2 |
| XR_004579764.1 | other | upstream | 1646721 | 1414504 ~ 1419435 (+) | False | ponzr2 |
| TU309863 | other | upstream | 1829024 | 1205991 ~ 1237132 (+) | True | G261503 |
| TU312620 | other | downstream | 2010151 | 5077881 ~ 5080617 (+) | False | triap1 |
| TU313203 | other | downstream | 2941070 | 6008800 ~ 6011902 (+) | True | G264336 |
| TU313925 | other | downstream | 3999141 | 7066871 ~ 7082441 (+) | True | G264948 |
| TU313944 | other | downstream | 4048330 | 7116060 ~ 7118616 (+) | False | ddx55 |
| trnar-ccu_6 | other | downstream | 4300750 | 7368480 ~ 7368552 (+) | True | trnar-ccu_6 |
