Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU313949 |
| length | 1066 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G264972 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 7152799 ~ 7153864 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU313921 | lncRNA | upstream | 61837 | 7089667 ~ 7090962 (+) | True | G264944 |
| TU313915 | lncRNA | upstream | 97140 | 7055347 ~ 7055659 (+) | True | G264938 |
| TU313913 | lncRNA | upstream | 98717 | 7053868 ~ 7054082 (+) | True | G264936 |
| TU313911 | lncRNA | upstream | 100859 | 7051504 ~ 7051940 (+) | True | G264934 |
| TU313910 | lncRNA | upstream | 101437 | 7051057 ~ 7051362 (+) | True | G264933 |
| TU313947 | lncRNA | downstream | 410 | 7154274 ~ 7157567 (+) | True | G264970 |
| TU313953 | lncRNA | downstream | 11264 | 7165128 ~ 7166073 (+) | True | G264976 |
| TU313963 | lncRNA | downstream | 94321 | 7248185 ~ 7249078 (+) | True | G264986 |
| TU314033 | lncRNA | downstream | 214625 | 7368489 ~ 7369482 (+) | True | G265039 |
| TU314005 | lncRNA | downstream | 263370 | 7417234 ~ 7417633 (+) | True | G265023 |
| XM_034312717.1 | mRNA | upstream | 494 | 7127751 ~ 7152305 (+) | True | naa25 |
| XM_034312715.1 | mRNA | upstream | 494 | 7127931 ~ 7152305 (+) | False | naa25 |
| XM_034312716.1 | mRNA | upstream | 494 | 7127931 ~ 7152305 (+) | False | naa25 |
| XM_034312947.1 | mRNA | upstream | 26553 | 7116051 ~ 7126246 (+) | True | ddx55 |
| XM_034312805.1 | mRNA | upstream | 38805 | 7108507 ~ 7113994 (+) | True | tmed2 |
| XM_026943803.2 | mRNA | downstream | 15384 | 7169248 ~ 7174553 (+) | False | tor4aa |
| XM_034312669.1 | mRNA | downstream | 17346 | 7171210 ~ 7174553 (+) | True | tor4aa |
| XM_034312670.1 | mRNA | downstream | 17346 | 7171210 ~ 7174553 (+) | False | tor4aa |
| XM_026943800.2 | mRNA | downstream | 17347 | 7171211 ~ 7174553 (+) | False | tor4aa |
| XM_026943942.2 | mRNA | downstream | 29084 | 7182948 ~ 7197818 (+) | True | slc25a1b |
| TU313944 | other | upstream | 34183 | 7116060 ~ 7118616 (+) | False | ddx55 |
| TU313925 | other | upstream | 70358 | 7066871 ~ 7082441 (+) | True | G264948 |
| TU313203 | other | upstream | 1140897 | 6008800 ~ 6011902 (+) | True | G264336 |
| TU312620 | other | upstream | 2072182 | 5077881 ~ 5080617 (+) | False | triap1 |
| TU311007 | other | upstream | 4335541 | 2795548 ~ 2817258 (+) | False | pcp4a |
| trnar-ccu_6 | other | downstream | 214616 | 7368480 ~ 7368552 (+) | True | trnar-ccu_6 |
| trnam-cau_30 | other | downstream | 214698 | 7368562 ~ 7368633 (+) | True | trnam-cau_30 |
| trnar-ccu_7 | other | downstream | 215399 | 7369263 ~ 7369335 (+) | True | trnar-ccu_7 |
| trnam-cau_31 | other | downstream | 215481 | 7369345 ~ 7369416 (+) | True | trnam-cau_31 |
| trnam-cau_32 | other | downstream | 215943 | 7369807 ~ 7369878 (+) | True | trnam-cau_32 |
