Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU314379 |
| length | 712 |
| lncRNA type | intronic |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G265328 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 7659527 ~ 7661080 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU314377 | lncRNA | upstream | 18791 | 7638978 ~ 7640736 (+) | True | G265326 |
| TU314376 | lncRNA | upstream | 21461 | 7636886 ~ 7638066 (+) | True | G265325 |
| TU314344 | lncRNA | upstream | 73625 | 7585611 ~ 7585902 (+) | True | G265294 |
| XR_004579804.1 | lncRNA | upstream | 104948 | 7549590 ~ 7554579 (+) | True | LOC113544905 |
| TU314382 | lncRNA | downstream | 46320 | 7707400 ~ 7709793 (+) | True | G265331 |
| TU314480 | lncRNA | downstream | 182709 | 7843789 ~ 7844656 (+) | True | G265417 |
| TU314446 | lncRNA | downstream | 183713 | 7844793 ~ 7847877 (+) | True | G265383 |
| TU314481 | lncRNA | downstream | 187723 | 7848803 ~ 7849034 (+) | True | G265418 |
| TU314482 | lncRNA | downstream | 190290 | 7851370 ~ 7851629 (+) | True | G265419 |
| XM_026943921.2 | mRNA | upstream | 38954 | 7618299 ~ 7620573 (+) | True | cryba4 |
| XM_034312378.1 | mRNA | upstream | 224601 | 7432541 ~ 7434926 (+) | True | LOC117599324 |
| XM_026943711.2 | mRNA | upstream | 266047 | 7384282 ~ 7393480 (+) | True | oclna |
| XM_034312854.1 | mRNA | upstream | 277539 | 7371090 ~ 7381988 (+) | False | marveld2a |
| XM_026943758.2 | mRNA | downstream | 56975 | 7718055 ~ 7770444 (+) | True | LOC113544796 |
| XM_026943759.2 | mRNA | downstream | 56975 | 7718055 ~ 7770444 (+) | False | LOC113544796 |
| XM_034312496.1 | mRNA | downstream | 124598 | 7785678 ~ 7855941 (+) | False | LOC113544706 |
| XM_026943618.2 | mRNA | downstream | 124600 | 7785680 ~ 7855941 (+) | True | LOC113544706 |
| XM_034312495.1 | mRNA | downstream | 145529 | 7806609 ~ 7855941 (+) | False | LOC113544706 |
| trnam-cau_33 | other | upstream | 289188 | 7370268 ~ 7370339 (+) | True | trnam-cau_33 |
| trnam-cau_32 | other | upstream | 289649 | 7369807 ~ 7369878 (+) | True | trnam-cau_32 |
| trnam-cau_31 | other | upstream | 290111 | 7369345 ~ 7369416 (+) | True | trnam-cau_31 |
| trnar-ccu_7 | other | upstream | 290192 | 7369263 ~ 7369335 (+) | True | trnar-ccu_7 |
| trnam-cau_30 | other | upstream | 290894 | 7368562 ~ 7368633 (+) | True | trnam-cau_30 |
| TU314651 | other | downstream | 515586 | 8176666 ~ 8187611 (+) | False | tmem167a |
| XR_003404565.2 | other | downstream | 613967 | 8275047 ~ 8276323 (+) | True | LOC113544932 |
| XR_003404563.2 | other | downstream | 672391 | 8333471 ~ 8353841 (+) | False | LOC113544929 |
| XR_003404564.2 | other | downstream | 672410 | 8333490 ~ 8353841 (+) | False | LOC113544929 |
| TU314760 | other | downstream | 672422 | 8333502 ~ 8353815 (+) | False | LOC113544929 |
