Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU314751 |
| length | 988 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G265622 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 8299824 ~ 8302919 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU314677 | lncRNA | upstream | 40442 | 8260516 ~ 8260754 (+) | True | G265565 |
| TU314676 | lncRNA | upstream | 40793 | 8260091 ~ 8260403 (+) | True | G265564 |
| TU314665 | lncRNA | upstream | 47988 | 8196581 ~ 8253208 (+) | True | G265553 |
| TU314656 | lncRNA | upstream | 111397 | 8189180 ~ 8189799 (+) | True | G265544 |
| TU314653 | lncRNA | upstream | 113585 | 8176666 ~ 8187611 (+) | False | tmem167a |
| TU314765 | lncRNA | downstream | 37591 | 8340510 ~ 8342287 (+) | True | G265635 |
| TU314768 | lncRNA | downstream | 71632 | 8374551 ~ 8374809 (+) | True | G265638 |
| TU314777 | lncRNA | downstream | 106727 | 8409646 ~ 8409861 (+) | True | G265647 |
| TU314778 | lncRNA | downstream | 108350 | 8411269 ~ 8411471 (+) | True | G265648 |
| TU314785 | lncRNA | downstream | 148270 | 8451189 ~ 8451413 (+) | True | G265655 |
| XM_034312463.1 | mRNA | upstream | 83928 | 8200080 ~ 8217268 (+) | True | LOC117595648 |
| XM_026943735.1 | mRNA | upstream | 113586 | 8176891 ~ 8187610 (+) | False | tmem167a |
| XM_026943629.2 | mRNA | upstream | 357068 | 7937228 ~ 7944128 (+) | True | cetn3 |
| XM_026943628.2 | mRNA | upstream | 357068 | 7937883 ~ 7944128 (+) | False | cetn3 |
| XM_026943772.2 | mRNA | upstream | 390941 | 7891511 ~ 7910255 (+) | True | scarb1 |
| XM_026944007.2 | mRNA | downstream | 26786 | 8329705 ~ 8353841 (+) | False | LOC113544929 |
| XM_026909772.2 | mRNA | downstream | 412510 | 8715429 ~ 8731985 (+) | True | rnft1 |
| XM_026909767.2 | mRNA | downstream | 769510 | 9072429 ~ 9076274 (+) | True | si:ch211-244c8.4 |
| XM_026927880.2 | mRNA | downstream | 832241 | 9135160 ~ 9151699 (+) | True | zdhhc20a |
| XM_026927881.2 | mRNA | downstream | 832242 | 9135161 ~ 9151699 (+) | False | zdhhc20a |
| XR_003404565.2 | other | upstream | 24873 | 8275047 ~ 8276323 (+) | True | LOC113544932 |
| TU314651 | other | upstream | 113585 | 8176666 ~ 8187611 (+) | False | tmem167a |
| trnam-cau_33 | other | upstream | 930857 | 7370268 ~ 7370339 (+) | True | trnam-cau_33 |
| trnam-cau_32 | other | upstream | 931318 | 7369807 ~ 7369878 (+) | True | trnam-cau_32 |
| trnam-cau_31 | other | upstream | 931780 | 7369345 ~ 7369416 (+) | True | trnam-cau_31 |
| XR_003404563.2 | other | downstream | 30552 | 8333471 ~ 8353841 (+) | False | LOC113544929 |
| XR_003404564.2 | other | downstream | 30571 | 8333490 ~ 8353841 (+) | False | LOC113544929 |
| TU314760 | other | downstream | 30583 | 8333502 ~ 8353815 (+) | False | LOC113544929 |
| XR_004579838.1 | other | downstream | 30699 | 8333618 ~ 8353841 (+) | True | LOC113544929 |
| TU314836 | other | downstream | 330716 | 8633635 ~ 8639728 (+) | True | G265696 |
