Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU315530 |
| length | 218 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G266282 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 9539082 ~ 9539299 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU315527 | lncRNA | upstream | 7304 | 9531369 ~ 9531778 (+) | True | G266279 |
| TU315494 | lncRNA | upstream | 42196 | 9496238 ~ 9496886 (+) | True | G266260 |
| TU315413 | lncRNA | upstream | 90741 | 9448072 ~ 9448341 (+) | True | G266185 |
| TU315412 | lncRNA | upstream | 91814 | 9447005 ~ 9447268 (+) | True | G266184 |
| TU315385 | lncRNA | upstream | 136364 | 9401931 ~ 9402718 (+) | True | G266159 |
| TU315524 | lncRNA | downstream | 37288 | 9576587 ~ 9580828 (+) | True | G266277 |
| TU315586 | lncRNA | downstream | 49579 | 9588878 ~ 9589123 (+) | True | G266323 |
| TU315691 | lncRNA | downstream | 225342 | 9764641 ~ 9766495 (+) | True | G266416 |
| TU315775 | lncRNA | downstream | 396690 | 9935989 ~ 9936213 (+) | True | G266495 |
| TU315779 | lncRNA | downstream | 398096 | 9937395 ~ 9940300 (+) | True | G266497 |
| XM_026941865.2 | mRNA | upstream | 3002 | 9524383 ~ 9536080 (+) | True | ypel2a |
| XM_026941859.2 | mRNA | upstream | 15267 | 9516188 ~ 9523815 (+) | True | smg8 |
| XM_026941863.2 | mRNA | upstream | 25234 | 9506112 ~ 9513848 (+) | True | prr11 |
| XM_026941864.2 | mRNA | upstream | 27653 | 9506121 ~ 9511429 (+) | False | prr11 |
| XM_026941860.2 | mRNA | upstream | 48858 | 9487494 ~ 9490224 (+) | True | rhbdd2 |
| XM_034312925.1 | mRNA | downstream | 3184 | 9542483 ~ 9555589 (+) | True | pom121 |
| XM_034312926.1 | mRNA | downstream | 3184 | 9542483 ~ 9555589 (+) | False | pom121 |
| XM_026941592.2 | mRNA | downstream | 29476 | 9568775 ~ 9580508 (+) | True | ripk4 |
| XM_026942050.2 | mRNA | downstream | 50717 | 9590016 ~ 9605564 (+) | True | c17h21orf91 |
| XM_026941736.2 | mRNA | downstream | 68948 | 9608247 ~ 9624536 (+) | True | supt20 |
| XR_003404427.2 | other | upstream | 114227 | 9419665 ~ 9424855 (+) | True | LOC113543674 |
| XR_004579762.1 | other | upstream | 114227 | 9420468 ~ 9424855 (+) | False | LOC113543674 |
| TU315389 | other | upstream | 202792 | 9335801 ~ 9336290 (+) | True | G266161 |
| TU314948 | other | upstream | 869285 | 8668814 ~ 8669797 (+) | True | G265807 |
| TU314836 | other | upstream | 899354 | 8633635 ~ 8639728 (+) | True | G265696 |
| XR_004579824.1 | other | downstream | 165061 | 9704360 ~ 9754590 (+) | False | dclk1a |
| TU316249 | other | downstream | 1029729 | 10569028 ~ 10570705 (+) | True | G266868 |
| XR_004579830.1 | other | downstream | 3776639 | 13315938 ~ 13316216 (+) | True | LOC113543571 |
| XR_004579771.1 | other | downstream | 5223014 | 14762313 ~ 14771073 (+) | False | vps36 |
| trnam-cau_35 | other | downstream | 7085610 | 16624909 ~ 16624980 (+) | True | trnam-cau_35 |
