Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU316497 |
| length | 349 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 2 |
| gene id | G267070 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 11056612 ~ 11057021 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU316486 | lncRNA | upstream | 14222 | 11042217 ~ 11042390 (+) | True | G267062 |
| TU316475 | lncRNA | upstream | 20382 | 11035998 ~ 11036230 (+) | True | G267051 |
| TU316348 | lncRNA | upstream | 174347 | 10881107 ~ 10882265 (+) | False | scaf4a |
| TU316349 | lncRNA | upstream | 174556 | 10881107 ~ 10882056 (+) | False | scaf4a |
| TU316342 | lncRNA | upstream | 236873 | 10819526 ~ 10819739 (+) | True | G266946 |
| TU316518 | lncRNA | downstream | 29227 | 11086248 ~ 11087863 (+) | True | G267090 |
| TU316536 | lncRNA | downstream | 54365 | 11111386 ~ 11111597 (+) | True | G267103 |
| TU316726 | lncRNA | downstream | 375638 | 11432659 ~ 11432862 (+) | True | G267257 |
| TU316789 | lncRNA | downstream | 567353 | 11624374 ~ 11627972 (+) | True | G267314 |
| TU316792 | lncRNA | downstream | 593408 | 11650429 ~ 11652188 (+) | True | G267317 |
| XM_034312913.1 | mRNA | upstream | 21285 | 10978094 ~ 11035327 (+) | True | grik1a |
| XM_026942029.2 | mRNA | downstream | 17634 | 11074655 ~ 11083609 (+) | True | cct8 |
| XM_026942003.2 | mRNA | downstream | 27008 | 11084029 ~ 11098340 (+) | True | tmem135 |
| XM_026941969.2 | mRNA | downstream | 90574 | 11147595 ~ 11151753 (+) | True | LOC113543610 |
| XM_026941625.2 | mRNA | downstream | 95054 | 11152075 ~ 11155690 (+) | True | kpna7 |
| XM_034312809.1 | mRNA | downstream | 110116 | 11167137 ~ 11219048 (+) | True | LOC113543473 |
| TU316249 | other | upstream | 485907 | 10569028 ~ 10570705 (+) | True | G266868 |
| XR_004579824.1 | other | upstream | 1302022 | 9704360 ~ 9754590 (+) | False | dclk1a |
| XR_003404427.2 | other | upstream | 1631757 | 9419665 ~ 9424855 (+) | True | LOC113543674 |
| XR_004579762.1 | other | upstream | 1631757 | 9420468 ~ 9424855 (+) | False | LOC113543674 |
| TU315389 | other | upstream | 1720322 | 9335801 ~ 9336290 (+) | True | G266161 |
| XR_004579830.1 | other | downstream | 2258917 | 13315938 ~ 13316216 (+) | True | LOC113543571 |
| XR_004579771.1 | other | downstream | 3705292 | 14762313 ~ 14771073 (+) | False | vps36 |
| trnam-cau_35 | other | downstream | 5567888 | 16624909 ~ 16624980 (+) | True | trnam-cau_35 |
| trnar-ccu_8 | other | downstream | 5568379 | 16625400 ~ 16625472 (+) | True | trnar-ccu_8 |
| trnam-cau_36 | other | downstream | 5568461 | 16625482 ~ 16625553 (+) | True | trnam-cau_36 |
