Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU319693 |
| length | 1204 |
| lncRNA type | read_through |
| GC content | 0.35 |
| exon number | 2 |
| gene id | G269852 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 15432044 ~ 15486563 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU319452 | lncRNA | upstream | 127170 | 15299894 ~ 15304874 (+) | True | G269642 |
| TU319448 | lncRNA | upstream | 133717 | 15296544 ~ 15298327 (+) | True | G269641 |
| TU319449 | lncRNA | upstream | 133717 | 15296658 ~ 15298327 (+) | False | G269641 |
| TU319450 | lncRNA | upstream | 133717 | 15296658 ~ 15298327 (+) | False | G269641 |
| TU319438 | lncRNA | upstream | 142601 | 15279083 ~ 15289443 (+) | True | G269635 |
| TU319847 | lncRNA | downstream | 435498 | 15922061 ~ 15929335 (+) | True | G269989 |
| TU319853 | lncRNA | downstream | 442879 | 15929442 ~ 15929868 (+) | True | G269993 |
| TU319854 | lncRNA | downstream | 443377 | 15929940 ~ 15930641 (+) | True | G269994 |
| TU319861 | lncRNA | downstream | 453942 | 15940505 ~ 15941293 (+) | True | G269997 |
| TU319862 | lncRNA | downstream | 454896 | 15941459 ~ 15941659 (+) | True | G269998 |
| XM_034312846.1 | mRNA | upstream | 110491 | 15310141 ~ 15321553 (+) | True | aldh7a1 |
| XM_034312477.1 | mRNA | upstream | 136988 | 15290550 ~ 15295056 (+) | True | LOC113543594 |
| XM_026941949.2 | mRNA | upstream | 136988 | 15290550 ~ 15295056 (+) | False | LOC113543594 |
| XM_026942015.2 | mRNA | upstream | 161814 | 15245742 ~ 15270230 (+) | False | marchf3 |
| XM_034312563.1 | mRNA | downstream | 64362 | 15550925 ~ 15753891 (+) | False | LOC113543513 |
| XM_026941778.2 | mRNA | downstream | 73163 | 15559726 ~ 15753891 (+) | False | LOC113543513 |
| XM_026941779.2 | mRNA | downstream | 73163 | 15559726 ~ 15753891 (+) | False | LOC113543513 |
| XM_026941780.2 | mRNA | downstream | 141724 | 15628287 ~ 15753891 (+) | True | LOC113543513 |
| XM_026941627.2 | mRNA | downstream | 427661 | 15914224 ~ 15919560 (+) | True | ubxn8 |
| XR_004579771.1 | other | upstream | 660971 | 14762313 ~ 14771073 (+) | False | vps36 |
| XR_004579830.1 | other | upstream | 2115828 | 13315938 ~ 13316216 (+) | True | LOC113543571 |
| TU316249 | other | upstream | 4861339 | 10569028 ~ 10570705 (+) | True | G266868 |
| XR_004579824.1 | other | upstream | 5677454 | 9704360 ~ 9754590 (+) | False | dclk1a |
| XR_004579762.1 | other | upstream | 6007189 | 9420468 ~ 9424855 (+) | False | LOC113543674 |
| trnam-cau_35 | other | downstream | 1138346 | 16624909 ~ 16624980 (+) | True | trnam-cau_35 |
| trnar-ccu_8 | other | downstream | 1138837 | 16625400 ~ 16625472 (+) | True | trnar-ccu_8 |
| trnam-cau_36 | other | downstream | 1138919 | 16625482 ~ 16625553 (+) | True | trnam-cau_36 |
| trnar-ccu_9 | other | downstream | 1139410 | 16625973 ~ 16626045 (+) | True | trnar-ccu_9 |
| trnam-cau_37 | other | downstream | 1139492 | 16626055 ~ 16626126 (+) | True | trnam-cau_37 |
