Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU319867 |
| length | 215 |
| lncRNA type | inter_gene |
| GC content | 0.25 |
| exon number | 2 |
| gene id | G270003 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 15954628 ~ 15954876 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0038003 | opioid receptor signaling pathway | biological_process |
| GO:0038023 | signaling receptor activity | molecular_function |
| GO:0060089 | molecular transducer activity | molecular_function |
| GO:0071855 | neuropeptide receptor binding | molecular_function |
| GO:0031841 | neuropeptide Y receptor binding | molecular_function |
| GO:0031843 | type 2 neuropeptide Y receptor binding | molecular_function |
| GO:0004888 | transmembrane signaling receptor activity | molecular_function |
| GO:0004930 | G protein-coupled receptor activity | molecular_function |
| GO:0001664 | G protein-coupled receptor binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU319866 | lncRNA | upstream | 8772 | 15944636 ~ 15945856 (+) | True | G270002 |
| TU319862 | lncRNA | upstream | 12969 | 15941459 ~ 15941659 (+) | True | G269998 |
| TU319861 | lncRNA | upstream | 13335 | 15940505 ~ 15941293 (+) | True | G269997 |
| TU319854 | lncRNA | upstream | 23987 | 15929940 ~ 15930641 (+) | True | G269994 |
| TU319853 | lncRNA | upstream | 24760 | 15929442 ~ 15929868 (+) | True | G269993 |
| TU319876 | lncRNA | downstream | 33409 | 15988285 ~ 15988510 (+) | True | G270012 |
| TU320120 | lncRNA | downstream | 33777 | 15988653 ~ 15988855 (+) | True | G270229 |
| TU320136 | lncRNA | downstream | 39977 | 15994853 ~ 15995055 (+) | True | G270236 |
| TU320194 | lncRNA | downstream | 155495 | 16110371 ~ 16138309 (+) | True | G270289 |
| XR_004579834.1 | lncRNA | downstream | 180433 | 16135309 ~ 16136866 (+) | True | LOC117599367 |
| XM_026941627.2 | mRNA | upstream | 35068 | 15914224 ~ 15919560 (+) | True | ubxn8 |
| XM_034312563.1 | mRNA | upstream | 200737 | 15550925 ~ 15753891 (+) | False | LOC113543513 |
| XM_026941830.2 | mRNA | downstream | 3682 | 15958558 ~ 15987780 (+) | True | wrn |
| XM_034312645.1 | mRNA | downstream | 38632 | 15993508 ~ 16075236 (+) | False | nrg1 |
| XM_034312644.1 | mRNA | downstream | 38635 | 15993511 ~ 16075236 (+) | False | nrg1 |
| XM_034312649.1 | mRNA | downstream | 38635 | 15993511 ~ 16075236 (+) | False | nrg1 |
| XM_034312650.1 | mRNA | downstream | 38635 | 15993511 ~ 16075236 (+) | False | nrg1 |
| XR_004579771.1 | other | upstream | 1183555 | 14762313 ~ 14771073 (+) | False | vps36 |
| XR_004579830.1 | other | upstream | 2638412 | 13315938 ~ 13316216 (+) | True | LOC113543571 |
| TU316249 | other | upstream | 5383923 | 10569028 ~ 10570705 (+) | True | G266868 |
| XR_004579824.1 | other | upstream | 6200038 | 9704360 ~ 9754590 (+) | False | dclk1a |
| XR_004579762.1 | other | upstream | 6529773 | 9420468 ~ 9424855 (+) | False | LOC113543674 |
| trnam-cau_35 | other | downstream | 670033 | 16624909 ~ 16624980 (+) | True | trnam-cau_35 |
| trnar-ccu_8 | other | downstream | 670524 | 16625400 ~ 16625472 (+) | True | trnar-ccu_8 |
| trnam-cau_36 | other | downstream | 670606 | 16625482 ~ 16625553 (+) | True | trnam-cau_36 |
| trnar-ccu_9 | other | downstream | 671097 | 16625973 ~ 16626045 (+) | True | trnar-ccu_9 |
| trnam-cau_37 | other | downstream | 671179 | 16626055 ~ 16626126 (+) | True | trnam-cau_37 |
