Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU320717 |
| length | 566 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 2 |
| gene id | G270716 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 16797845 ~ 16798435 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU320608 | lncRNA | upstream | 171487 | 16625984 ~ 16626358 (+) | True | G270626 |
| TU320506 | lncRNA | upstream | 220605 | 16576363 ~ 16577240 (+) | True | G270536 |
| TU320489 | lncRNA | upstream | 287098 | 16510543 ~ 16510747 (+) | True | G270525 |
| TU320479 | lncRNA | upstream | 411913 | 16385030 ~ 16385932 (+) | True | G270520 |
| TU320453 | lncRNA | upstream | 446386 | 16351248 ~ 16351459 (+) | True | G270495 |
| TU320859 | lncRNA | downstream | 262546 | 17060981 ~ 17078555 (+) | True | G270833 |
| TU320884 | lncRNA | downstream | 288960 | 17087395 ~ 17087922 (+) | True | G270856 |
| TU320889 | lncRNA | downstream | 300706 | 17099141 ~ 17101046 (+) | False | si:ch73-234b20.5 |
| TU320899 | lncRNA | downstream | 329582 | 17128017 ~ 17138981 (+) | True | G270870 |
| TU320901 | lncRNA | downstream | 331257 | 17129692 ~ 17140573 (+) | True | G270872 |
| XM_026941590.2 | mRNA | upstream | 534 | 16792626 ~ 16797311 (+) | True | macir |
| XM_034312274.1 | mRNA | upstream | 534 | 16792651 ~ 16797311 (+) | False | macir |
| XM_034312484.1 | mRNA | upstream | 10210 | 16748920 ~ 16787635 (+) | False | ppip5k2 |
| XM_034312486.1 | mRNA | upstream | 10210 | 16749087 ~ 16787635 (+) | False | ppip5k2 |
| XM_034312490.1 | mRNA | upstream | 10210 | 16749087 ~ 16787635 (+) | False | ppip5k2 |
| XM_034312324.1 | mRNA | downstream | 4023 | 16802458 ~ 16805021 (+) | True | LOC117599317 |
| XM_026942506.2 | mRNA | downstream | 29727 | 16828162 ~ 16892899 (+) | False | syk |
| XM_034312418.1 | mRNA | downstream | 62345 | 16860780 ~ 16892899 (+) | False | syk |
| XM_026942505.2 | mRNA | downstream | 69648 | 16868083 ~ 16892899 (+) | True | syk |
| XM_026942504.2 | mRNA | downstream | 69648 | 16868083 ~ 16892899 (+) | False | syk |
| trnam-cau_39 | other | upstream | 168950 | 16628824 ~ 16628895 (+) | True | trnam-cau_39 |
| trnar-ccu_10 | other | upstream | 169031 | 16628742 ~ 16628814 (+) | True | trnar-ccu_10 |
| trnam-cau_38 | other | upstream | 170970 | 16626804 ~ 16626875 (+) | True | trnam-cau_38 |
| trnam-cau_37 | other | upstream | 171719 | 16626055 ~ 16626126 (+) | True | trnam-cau_37 |
| trnar-ccu_9 | other | upstream | 171800 | 16625973 ~ 16626045 (+) | True | trnar-ccu_9 |
| trnar-ccu_11 | other | downstream | 289233 | 17087668 ~ 17087740 (+) | True | trnar-ccu_11 |
| trnam-cau_40 | other | downstream | 289313 | 17087748 ~ 17087819 (+) | True | trnam-cau_40 |
| trnar-ccu_12 | other | downstream | 290014 | 17088449 ~ 17088521 (+) | True | trnar-ccu_12 |
| trnam-cau_41 | other | downstream | 290094 | 17088529 ~ 17088600 (+) | True | trnam-cau_41 |
| trnar-ccu_13 | other | downstream | 290792 | 17089227 ~ 17089299 (+) | True | trnar-ccu_13 |
