Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU320859 |
| length | 556 |
| lncRNA type | inter_gene |
| GC content | 0.53 |
| exon number | 2 |
| gene id | G270833 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 17060981 ~ 17078555 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU320717 | lncRNA | upstream | 262546 | 16797845 ~ 16798435 (+) | True | G270716 |
| TU320608 | lncRNA | upstream | 434623 | 16625984 ~ 16626358 (+) | True | G270626 |
| TU320506 | lncRNA | upstream | 483741 | 16576363 ~ 16577240 (+) | True | G270536 |
| TU320489 | lncRNA | upstream | 550234 | 16510543 ~ 16510747 (+) | True | G270525 |
| TU320479 | lncRNA | upstream | 675049 | 16385030 ~ 16385932 (+) | True | G270520 |
| TU320884 | lncRNA | downstream | 8840 | 17087395 ~ 17087922 (+) | True | G270856 |
| TU320889 | lncRNA | downstream | 20586 | 17099141 ~ 17101046 (+) | False | si:ch73-234b20.5 |
| TU320899 | lncRNA | downstream | 49462 | 17128017 ~ 17138981 (+) | True | G270870 |
| TU320901 | lncRNA | downstream | 51137 | 17129692 ~ 17140573 (+) | True | G270872 |
| TU320902 | lncRNA | downstream | 58157 | 17136712 ~ 17149419 (+) | True | G270873 |
| XM_026942506.2 | mRNA | upstream | 168082 | 16828162 ~ 16892899 (+) | False | syk |
| XM_034312418.1 | mRNA | upstream | 168082 | 16860780 ~ 16892899 (+) | False | syk |
| XM_026942505.2 | mRNA | upstream | 168082 | 16868083 ~ 16892899 (+) | True | syk |
| XM_026942504.2 | mRNA | upstream | 168082 | 16868083 ~ 16892899 (+) | False | syk |
| XM_026942507.2 | mRNA | upstream | 168082 | 16868083 ~ 16892899 (+) | False | syk |
| XM_026942594.2 | mRNA | downstream | 20541 | 17099096 ~ 17101069 (+) | True | si:ch73-234b20.5 |
| XM_026942582.2 | mRNA | downstream | 35470 | 17114025 ~ 17123570 (+) | True | enoph1 |
| XM_026942595.2 | mRNA | downstream | 111400 | 17189955 ~ 17212123 (+) | True | snx30 |
| XM_026942846.2 | mRNA | downstream | 276544 | 17355099 ~ 17396817 (+) | True | plppr1 |
| XM_026942673.2 | mRNA | downstream | 474376 | 17552931 ~ 17609585 (+) | True | LOC113544058 |
| trnam-cau_39 | other | upstream | 432086 | 16628824 ~ 16628895 (+) | True | trnam-cau_39 |
| trnar-ccu_10 | other | upstream | 432167 | 16628742 ~ 16628814 (+) | True | trnar-ccu_10 |
| trnam-cau_38 | other | upstream | 434106 | 16626804 ~ 16626875 (+) | True | trnam-cau_38 |
| trnam-cau_37 | other | upstream | 434855 | 16626055 ~ 16626126 (+) | True | trnam-cau_37 |
| trnar-ccu_9 | other | upstream | 434936 | 16625973 ~ 16626045 (+) | True | trnar-ccu_9 |
| trnar-ccu_11 | other | downstream | 9113 | 17087668 ~ 17087740 (+) | True | trnar-ccu_11 |
| trnam-cau_40 | other | downstream | 9193 | 17087748 ~ 17087819 (+) | True | trnam-cau_40 |
| trnar-ccu_12 | other | downstream | 9894 | 17088449 ~ 17088521 (+) | True | trnar-ccu_12 |
| trnam-cau_41 | other | downstream | 9974 | 17088529 ~ 17088600 (+) | True | trnam-cau_41 |
| trnar-ccu_13 | other | downstream | 10672 | 17089227 ~ 17089299 (+) | True | trnar-ccu_13 |
