Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU320901 |
| length | 842 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G270872 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 17129692 ~ 17140573 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU320889 | lncRNA | upstream | 28646 | 17099141 ~ 17101046 (+) | False | si:ch73-234b20.5 |
| TU320884 | lncRNA | upstream | 41770 | 17087395 ~ 17087922 (+) | True | G270856 |
| TU320859 | lncRNA | upstream | 51137 | 17060981 ~ 17078555 (+) | True | G270833 |
| TU320717 | lncRNA | upstream | 331257 | 16797845 ~ 16798435 (+) | True | G270716 |
| TU320608 | lncRNA | upstream | 503334 | 16625984 ~ 16626358 (+) | True | G270626 |
| TU320928 | lncRNA | downstream | 137083 | 17277656 ~ 17292883 (+) | True | G270893 |
| TU320948 | lncRNA | downstream | 221372 | 17361945 ~ 17388979 (+) | True | G270913 |
| TU321185 | lncRNA | downstream | 549083 | 17689656 ~ 17690861 (+) | True | G271076 |
| TU321215 | lncRNA | downstream | 618977 | 17759550 ~ 17764529 (+) | True | G271102 |
| TU321218 | lncRNA | downstream | 629196 | 17769769 ~ 17773380 (+) | True | G271104 |
| XM_026942582.2 | mRNA | upstream | 6122 | 17114025 ~ 17123570 (+) | True | enoph1 |
| XM_026942594.2 | mRNA | upstream | 28623 | 17099096 ~ 17101069 (+) | True | si:ch73-234b20.5 |
| XM_026942508.2 | mRNA | upstream | 236793 | 16868084 ~ 16892899 (+) | False | syk |
| XM_026942595.2 | mRNA | downstream | 49382 | 17189955 ~ 17212123 (+) | True | snx30 |
| XM_026942846.2 | mRNA | downstream | 214526 | 17355099 ~ 17396817 (+) | True | plppr1 |
| XM_026942673.2 | mRNA | downstream | 412358 | 17552931 ~ 17609585 (+) | True | LOC113544058 |
| XM_034312655.1 | mRNA | downstream | 412358 | 17552931 ~ 17607000 (+) | False | LOC113544058 |
| XM_034312656.1 | mRNA | downstream | 412358 | 17552931 ~ 17567593 (+) | False | LOC113544058 |
| trnam-cau_42 | other | upstream | 40314 | 17089307 ~ 17089378 (+) | True | trnam-cau_42 |
| trnar-ccu_13 | other | upstream | 40393 | 17089227 ~ 17089299 (+) | True | trnar-ccu_13 |
| trnam-cau_41 | other | upstream | 41092 | 17088529 ~ 17088600 (+) | True | trnam-cau_41 |
| trnar-ccu_12 | other | upstream | 41171 | 17088449 ~ 17088521 (+) | True | trnar-ccu_12 |
| trnam-cau_40 | other | upstream | 41873 | 17087748 ~ 17087819 (+) | True | trnam-cau_40 |
| TU321580 | other | downstream | 1263696 | 18404269 ~ 18407498 (+) | False | G271406 |
| TU321582 | other | downstream | 1263696 | 18404269 ~ 18407498 (+) | True | G271406 |
| trnam-cau_43 | other | downstream | 1318512 | 18459085 ~ 18459156 (+) | True | trnam-cau_43 |
| trnar-ccu_14 | other | downstream | 1319219 | 18459792 ~ 18459864 (+) | True | trnar-ccu_14 |
| trnar-ccu_15 | other | downstream | 1321659 | 18462232 ~ 18462304 (+) | True | trnar-ccu_15 |
