Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU321792 |
| length | 1058 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G271576 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 19011175 ~ 19012232 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU321787 | lncRNA | upstream | 47395 | 18963355 ~ 18963780 (+) | True | G271571 |
| TU321785 | lncRNA | upstream | 49620 | 18961302 ~ 18961555 (+) | True | G271569 |
| TU321784 | lncRNA | upstream | 50408 | 18960528 ~ 18960767 (+) | True | G271568 |
| TU321754 | lncRNA | upstream | 50908 | 18958168 ~ 18960267 (+) | True | G271540 |
| TU321773 | lncRNA | upstream | 68156 | 18942757 ~ 18943019 (+) | True | G271557 |
| TU322140 | lncRNA | downstream | 216829 | 19229061 ~ 19229423 (+) | True | G271853 |
| TU322180 | lncRNA | downstream | 321614 | 19333846 ~ 19335880 (+) | True | G271884 |
| TU322221 | lncRNA | downstream | 470265 | 19482497 ~ 19484904 (+) | True | G271923 |
| TU322222 | lncRNA | downstream | 477326 | 19489558 ~ 19494875 (+) | False | LOC113544004 |
| TU322223 | lncRNA | downstream | 483933 | 19496165 ~ 19496866 (+) | False | LOC113544004 |
| XM_034312680.1 | mRNA | upstream | 382 | 18983133 ~ 19010793 (+) | True | aak1b |
| XM_034312681.1 | mRNA | upstream | 382 | 18983133 ~ 19010793 (+) | False | aak1b |
| XM_034312682.1 | mRNA | upstream | 9029 | 18983133 ~ 19002146 (+) | False | aak1b |
| XM_026942458.2 | mRNA | upstream | 53131 | 18948898 ~ 18958044 (+) | True | trim69 |
| XM_026942471.2 | mRNA | upstream | 104986 | 18900743 ~ 18906189 (+) | False | plpp5 |
| XM_034312828.1 | mRNA | downstream | 55974 | 19068206 ~ 19073060 (+) | True | LOC117599383 |
| XM_034312829.1 | mRNA | downstream | 70289 | 19082521 ~ 19101181 (+) | True | LOC113544111 |
| XM_026942824.2 | mRNA | downstream | 90961 | 19103193 ~ 19119113 (+) | True | ddhd2 |
| XM_026942825.2 | mRNA | downstream | 91474 | 19103706 ~ 19119113 (+) | False | ddhd2 |
| XM_034312899.1 | mRNA | downstream | 91509 | 19103741 ~ 19119113 (+) | False | ddhd2 |
| trnas-uga_9 | other | upstream | 74205 | 18936889 ~ 18936970 (+) | True | trnas-uga_9 |
| trnas-uga_8 | other | upstream | 75187 | 18935907 ~ 18935988 (+) | True | trnas-uga_8 |
| trnas-uga_7 | other | upstream | 75497 | 18935597 ~ 18935678 (+) | True | trnas-uga_7 |
| trnas-uga_6 | other | upstream | 75962 | 18935132 ~ 18935213 (+) | True | trnas-uga_6 |
| trnas-cga_2 | other | upstream | 76210 | 18934884 ~ 18934965 (+) | True | trnas-cga_2 |
| TU322151 | other | downstream | 229477 | 19241709 ~ 19243905 (+) | True | G271863 |
| XR_004579823.1 | other | downstream | 363865 | 19376097 ~ 19409418 (+) | False | LOC113544086 |
| TU322206 | other | downstream | 387366 | 19399598 ~ 19404927 (+) | False | LOC113544086 |
| TU322526 | other | downstream | 770195 | 19782427 ~ 19786819 (+) | False | LOC113543969 |
| TU322527 | other | downstream | 770195 | 19782427 ~ 19786819 (+) | True | LOC113543969 |
