Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU322206 |
| length | 973 |
| RNA type | TUCP |
| GC content | 0.39 |
| exon number | 5 |
| gene id | LOC113544086 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 19376092 ~ 19414627 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU322180 | lncRNA | upstream | 63718 | 19333846 ~ 19335880 (+) | True | G271884 |
| TU322140 | lncRNA | upstream | 170175 | 19229061 ~ 19229423 (+) | True | G271853 |
| TU321792 | lncRNA | upstream | 387366 | 19011175 ~ 19012232 (+) | True | G271576 |
| TU321787 | lncRNA | upstream | 435818 | 18963355 ~ 18963780 (+) | True | G271571 |
| TU321785 | lncRNA | upstream | 438043 | 18961302 ~ 18961555 (+) | True | G271569 |
| TU322221 | lncRNA | downstream | 77570 | 19482497 ~ 19484904 (+) | True | G271923 |
| TU322222 | lncRNA | downstream | 84631 | 19489558 ~ 19494875 (+) | False | LOC113544004 |
| TU322223 | lncRNA | downstream | 91238 | 19496165 ~ 19496866 (+) | False | LOC113544004 |
| XR_004579783.1 | lncRNA | downstream | 412251 | 19817178 ~ 19825232 (+) | True | LOC113544143 |
| TU322531 | lncRNA | downstream | 413540 | 19818467 ~ 19825232 (+) | False | G272180 |
| XM_026942743.2 | mRNA | upstream | 24263 | 19369830 ~ 19375335 (+) | True | pbdc1 |
| XM_026942767.2 | mRNA | upstream | 124745 | 19258631 ~ 19274853 (+) | True | sfrp1b |
| XM_026942778.2 | mRNA | upstream | 171675 | 19182347 ~ 19227923 (+) | True | loxl2a |
| XM_026942777.2 | mRNA | upstream | 171675 | 19182348 ~ 19227923 (+) | False | loxl2a |
| XM_034312872.1 | mRNA | upstream | 220750 | 19173255 ~ 19178848 (+) | True | si:ch211-113d22.2 |
| XM_034312673.1 | mRNA | downstream | 19220 | 19424147 ~ 19440355 (+) | True | LOC113544087 |
| XM_034312674.1 | mRNA | downstream | 20815 | 19425742 ~ 19440355 (+) | False | LOC113544087 |
| XM_034312831.1 | mRNA | downstream | 44878 | 19449805 ~ 19468222 (+) | True | LOC117599384 |
| XM_034312832.1 | mRNA | downstream | 80345 | 19485272 ~ 19489094 (+) | True | LOC117599385 |
| XM_034312833.1 | mRNA | downstream | 84279 | 19489206 ~ 19520777 (+) | True | LOC113544004 |
| TU322151 | other | upstream | 155693 | 19241709 ~ 19243905 (+) | True | G271863 |
| trnas-uga_9 | other | upstream | 462628 | 18936889 ~ 18936970 (+) | True | trnas-uga_9 |
| trnas-uga_8 | other | upstream | 463610 | 18935907 ~ 18935988 (+) | True | trnas-uga_8 |
| trnas-uga_7 | other | upstream | 463920 | 18935597 ~ 18935678 (+) | True | trnas-uga_7 |
| trnas-uga_6 | other | upstream | 464385 | 18935132 ~ 18935213 (+) | True | trnas-uga_6 |
| TU322526 | other | downstream | 377500 | 19782427 ~ 19786819 (+) | False | LOC113543969 |
| TU322527 | other | downstream | 377500 | 19782427 ~ 19786819 (+) | True | LOC113543969 |
| XR_003404464.2 | other | downstream | 377653 | 19782580 ~ 19786831 (+) | False | LOC113543969 |
| TU322529 | other | downstream | 388985 | 19793912 ~ 19805795 (+) | True | G272180 |
| TU322530 | other | downstream | 388985 | 19793912 ~ 19805795 (+) | False | G272180 |
