Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU324813 |
| length | 444 |
| lncRNA type | sense_over |
| GC content | 0.32 |
| exon number | 2 |
| gene id | G274161 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 23675643 ~ 23677227 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0044451 | obsolete nucleoplasm part | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU324528 | lncRNA | upstream | 277112 | 23396808 ~ 23398531 (+) | True | G273900 |
| TU324506 | lncRNA | upstream | 342094 | 23286000 ~ 23333549 (+) | True | G273880 |
| TU324488 | lncRNA | upstream | 395854 | 23261046 ~ 23279789 (+) | False | G273865 |
| TU324489 | lncRNA | upstream | 395854 | 23270148 ~ 23279789 (+) | True | G273865 |
| TU324487 | lncRNA | upstream | 397793 | 23274822 ~ 23277850 (+) | False | G273865 |
| TU324841 | lncRNA | downstream | 174770 | 23851997 ~ 23852218 (+) | True | G274186 |
| TU324847 | lncRNA | downstream | 182597 | 23859824 ~ 23860703 (+) | True | G274192 |
| TU324848 | lncRNA | downstream | 191627 | 23868854 ~ 23869197 (+) | True | G274193 |
| TU324880 | lncRNA | downstream | 260806 | 23938033 ~ 23940111 (+) | False | cdc37l1 |
| TU324897 | lncRNA | downstream | 268389 | 23945616 ~ 23946507 (+) | True | G274239 |
| XM_034312337.1 | mRNA | upstream | 35296 | 23624137 ~ 23640347 (+) | True | urm1 |
| XM_026942519.2 | mRNA | upstream | 35296 | 23624137 ~ 23640347 (+) | False | urm1 |
| XM_026942654.2 | mRNA | upstream | 57122 | 23566714 ~ 23618521 (+) | True | sh2d3ca |
| XM_026942655.2 | mRNA | upstream | 60186 | 23566715 ~ 23615457 (+) | False | sh2d3ca |
| XM_026942657.2 | mRNA | upstream | 60186 | 23577525 ~ 23615457 (+) | False | sh2d3ca |
| XM_026942634.2 | mRNA | downstream | 6323 | 23683550 ~ 23721518 (+) | True | sardh |
| XM_026942637.2 | mRNA | downstream | 77890 | 23755117 ~ 23777033 (+) | True | fam163ba |
| XM_026942790.2 | mRNA | downstream | 104129 | 23781356 ~ 23786783 (+) | True | swi5 |
| XM_034312902.1 | mRNA | downstream | 112205 | 23789432 ~ 23809829 (+) | True | slc27a4 |
| XM_026942804.2 | mRNA | downstream | 138449 | 23815676 ~ 23831525 (+) | True | ptgdsa |
| TU324491 | other | upstream | 315140 | 23321571 ~ 23360503 (+) | False | LOC113543986 |
| TU324492 | other | upstream | 401473 | 23265453 ~ 23274170 (+) | False | rc3h2 |
| TU324289 | other | upstream | 546323 | 23125367 ~ 23129320 (+) | False | lhx6 |
| XR_003404475.2 | other | upstream | 1010073 | 22622428 ~ 22665570 (+) | True | lrrtm4l1 |
| TU323909 | other | upstream | 1300768 | 22369274 ~ 22374875 (+) | False | tmem230a |
| TU324879 | other | downstream | 425862 | 24103089 ~ 24104595 (+) | False | hsdl2 |
| TU325154 | other | downstream | 550154 | 24227381 ~ 24228678 (+) | False | LOC117599389 |
| TU325389 | other | downstream | 852751 | 24529978 ~ 24587552 (+) | False | erbin |
