Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU324880 |
| length | 1154 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 3 |
| gene id | cdc37l1 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 23937978 ~ 23940132 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU324848 | lncRNA | upstream | 68836 | 23868854 ~ 23869197 (+) | True | G274193 |
| TU324847 | lncRNA | upstream | 77330 | 23859824 ~ 23860703 (+) | True | G274192 |
| TU324841 | lncRNA | upstream | 85815 | 23851997 ~ 23852218 (+) | True | G274186 |
| TU324813 | lncRNA | upstream | 260806 | 23675643 ~ 23677227 (+) | True | G274161 |
| TU324528 | lncRNA | upstream | 539502 | 23396808 ~ 23398531 (+) | True | G273900 |
| TU324897 | lncRNA | downstream | 5505 | 23945616 ~ 23946507 (+) | True | G274239 |
| TU324954 | lncRNA | downstream | 167537 | 24107648 ~ 24110738 (+) | True | G274289 |
| TU325129 | lncRNA | downstream | 184625 | 24124736 ~ 24125213 (+) | True | G274431 |
| TU325153 | lncRNA | downstream | 286043 | 24226154 ~ 24226807 (+) | False | LOC117599389 |
| TU325166 | lncRNA | downstream | 317796 | 24257907 ~ 24261576 (+) | False | G274457 |
| XM_034312903.1 | mRNA | upstream | 92638 | 23835167 ~ 23845395 (+) | True | ambp |
| XM_026942804.2 | mRNA | upstream | 106508 | 23815676 ~ 23831525 (+) | True | ptgdsa |
| XM_034312902.1 | mRNA | upstream | 128204 | 23789432 ~ 23809829 (+) | True | slc27a4 |
| XM_026942790.2 | mRNA | upstream | 151250 | 23781356 ~ 23786783 (+) | True | swi5 |
| XM_026942637.2 | mRNA | upstream | 161000 | 23755117 ~ 23777033 (+) | True | fam163ba |
| XM_034312839.1 | mRNA | downstream | 31327 | 23971438 ~ 24011050 (+) | True | ugcg |
| XM_026942828.2 | mRNA | downstream | 162962 | 24103073 ~ 24112853 (+) | True | hsdl2 |
| XM_034312840.1 | mRNA | downstream | 286688 | 24226799 ~ 24232819 (+) | True | LOC117599389 |
| XM_026942694.2 | mRNA | downstream | 293649 | 24233760 ~ 24252068 (+) | True | LOC113544070 |
| XM_034312594.1 | mRNA | downstream | 293649 | 24233760 ~ 24246783 (+) | False | LOC113544070 |
| TU324491 | other | upstream | 577530 | 23321571 ~ 23360503 (+) | False | LOC113543986 |
| TU324492 | other | upstream | 663863 | 23265453 ~ 23274170 (+) | False | rc3h2 |
| TU324289 | other | upstream | 808713 | 23125367 ~ 23129320 (+) | False | lhx6 |
| XR_003404475.2 | other | upstream | 1272463 | 22622428 ~ 22665570 (+) | True | lrrtm4l1 |
| TU323909 | other | upstream | 1563158 | 22369274 ~ 22374875 (+) | False | tmem230a |
| TU324879 | other | downstream | 162978 | 24103089 ~ 24104595 (+) | False | hsdl2 |
| TU325154 | other | downstream | 287270 | 24227381 ~ 24228678 (+) | False | LOC117599389 |
| TU325389 | other | downstream | 589867 | 24529978 ~ 24587552 (+) | False | erbin |
