Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU324897 |
| length | 596 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G274239 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 23945616 ~ 23946507 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU324880 | lncRNA | upstream | 5505 | 23938033 ~ 23940111 (+) | False | cdc37l1 |
| TU324848 | lncRNA | upstream | 76419 | 23868854 ~ 23869197 (+) | True | G274193 |
| TU324847 | lncRNA | upstream | 84913 | 23859824 ~ 23860703 (+) | True | G274192 |
| TU324841 | lncRNA | upstream | 93398 | 23851997 ~ 23852218 (+) | True | G274186 |
| TU324813 | lncRNA | upstream | 268389 | 23675643 ~ 23677227 (+) | True | G274161 |
| TU324954 | lncRNA | downstream | 161141 | 24107648 ~ 24110738 (+) | True | G274289 |
| TU325129 | lncRNA | downstream | 178229 | 24124736 ~ 24125213 (+) | True | G274431 |
| TU325153 | lncRNA | downstream | 279647 | 24226154 ~ 24226807 (+) | False | LOC117599389 |
| TU325166 | lncRNA | downstream | 311400 | 24257907 ~ 24261576 (+) | False | G274457 |
| TU325164 | lncRNA | downstream | 313202 | 24259709 ~ 24261542 (+) | True | G274457 |
| XM_034312838.1 | mRNA | upstream | 5484 | 23937978 ~ 23940132 (+) | True | cdc37l1 |
| XM_034312903.1 | mRNA | upstream | 100221 | 23835167 ~ 23845395 (+) | True | ambp |
| XM_026942804.2 | mRNA | upstream | 114091 | 23815676 ~ 23831525 (+) | True | ptgdsa |
| XM_034312902.1 | mRNA | upstream | 135787 | 23789432 ~ 23809829 (+) | True | slc27a4 |
| XM_026942790.2 | mRNA | upstream | 158833 | 23781356 ~ 23786783 (+) | True | swi5 |
| XM_034312839.1 | mRNA | downstream | 24931 | 23971438 ~ 24011050 (+) | True | ugcg |
| XM_026942828.2 | mRNA | downstream | 156566 | 24103073 ~ 24112853 (+) | True | hsdl2 |
| XM_034312840.1 | mRNA | downstream | 280292 | 24226799 ~ 24232819 (+) | True | LOC117599389 |
| XM_026942694.2 | mRNA | downstream | 287253 | 24233760 ~ 24252068 (+) | True | LOC113544070 |
| XM_034312594.1 | mRNA | downstream | 287253 | 24233760 ~ 24246783 (+) | False | LOC113544070 |
| TU324491 | other | upstream | 585113 | 23321571 ~ 23360503 (+) | False | LOC113543986 |
| TU324492 | other | upstream | 671446 | 23265453 ~ 23274170 (+) | False | rc3h2 |
| TU324289 | other | upstream | 816296 | 23125367 ~ 23129320 (+) | False | lhx6 |
| XR_003404475.2 | other | upstream | 1280046 | 22622428 ~ 22665570 (+) | True | lrrtm4l1 |
| TU323909 | other | upstream | 1570741 | 22369274 ~ 22374875 (+) | False | tmem230a |
| TU324879 | other | downstream | 156582 | 24103089 ~ 24104595 (+) | False | hsdl2 |
| TU325154 | other | downstream | 280874 | 24227381 ~ 24228678 (+) | False | LOC117599389 |
| TU325389 | other | downstream | 583471 | 24529978 ~ 24587552 (+) | False | erbin |
