Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU325164 |
| length | 1130 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G274457 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 24257907 ~ 24261576 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU325153 | lncRNA | upstream | 32902 | 24226154 ~ 24226807 (+) | False | LOC117599389 |
| TU325129 | lncRNA | upstream | 134496 | 24124736 ~ 24125213 (+) | True | G274431 |
| TU324954 | lncRNA | upstream | 148971 | 24107648 ~ 24110738 (+) | True | G274289 |
| TU324897 | lncRNA | upstream | 313202 | 23945616 ~ 23946507 (+) | True | G274239 |
| TU324880 | lncRNA | upstream | 319598 | 23938033 ~ 23940111 (+) | False | cdc37l1 |
| TU325323 | lncRNA | downstream | 141481 | 24403023 ~ 24491201 (+) | True | G274583 |
| TU325373 | lncRNA | downstream | 229873 | 24491415 ~ 24491856 (+) | True | G274624 |
| TU325331 | lncRNA | downstream | 234368 | 24495910 ~ 24498527 (+) | False | trappc13 |
| TU325332 | lncRNA | downstream | 234368 | 24495910 ~ 24498642 (+) | False | trappc13 |
| TU325393 | lncRNA | downstream | 275588 | 24537130 ~ 24537736 (+) | True | G274639 |
| XM_026942694.2 | mRNA | upstream | 7641 | 24233760 ~ 24252068 (+) | True | LOC113544070 |
| XM_034312594.1 | mRNA | upstream | 12926 | 24233760 ~ 24246783 (+) | False | LOC113544070 |
| XM_034312840.1 | mRNA | upstream | 26890 | 24226799 ~ 24232819 (+) | True | LOC117599389 |
| XM_026942828.2 | mRNA | upstream | 146856 | 24103073 ~ 24112853 (+) | True | hsdl2 |
| XM_034312839.1 | mRNA | upstream | 248659 | 23971438 ~ 24011050 (+) | True | ugcg |
| XM_034312929.1 | mRNA | downstream | 14540 | 24276082 ~ 24296725 (+) | True | cops4 |
| XM_034312916.1 | mRNA | downstream | 48489 | 24310031 ~ 24359123 (+) | False | cwc27 |
| XM_034312917.1 | mRNA | downstream | 48489 | 24310031 ~ 24359123 (+) | True | cwc27 |
| XM_034312584.1 | mRNA | downstream | 195494 | 24457036 ~ 24465100 (+) | True | ppwd1 |
| XM_034312919.1 | mRNA | downstream | 219057 | 24480599 ~ 24497242 (+) | True | trappc13 |
| TU325154 | other | upstream | 31031 | 24227381 ~ 24228678 (+) | False | LOC117599389 |
| TU324879 | other | upstream | 155114 | 24103089 ~ 24104595 (+) | False | hsdl2 |
| TU324491 | other | upstream | 899206 | 23321571 ~ 23360503 (+) | False | LOC113543986 |
| TU324492 | other | upstream | 985539 | 23265453 ~ 23274170 (+) | False | rc3h2 |
| TU324289 | other | upstream | 1130389 | 23125367 ~ 23129320 (+) | False | lhx6 |
| TU325389 | other | downstream | 268436 | 24529978 ~ 24587552 (+) | False | erbin |
