Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU325248 |
| length | 544 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 5 |
| gene id | LOC113544170 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 24297476 ~ 24301032 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU325222 | lncRNA | downstream | 49924 | 24245196 ~ 24247557 (-) | True | G274489 |
| XR_004579775.1 | lncRNA | downstream | 79803 | 24216715 ~ 24217678 (-) | True | LOC113543934 |
| XR_004579785.1 | lncRNA | downstream | 171274 | 24125158 ~ 24126207 (-) | True | LOC117599329 |
| TU325121 | lncRNA | downstream | 188033 | 24108470 ~ 24109448 (-) | True | G274425 |
| TU325115 | lncRNA | downstream | 193379 | 24103011 ~ 24104102 (-) | True | G274421 |
| TU325539 | lncRNA | upstream | 190462 | 24491466 ~ 24492114 (-) | True | G274771 |
| TU325551 | lncRNA | upstream | 212284 | 24513288 ~ 24651673 (-) | True | G274781 |
| TU325584 | lncRNA | upstream | 245196 | 24546200 ~ 24547152 (-) | True | G274804 |
| TU325610 | lncRNA | upstream | 263638 | 24564642 ~ 24606916 (-) | False | G274810 |
| TU325607 | lncRNA | upstream | 266976 | 24567980 ~ 24617704 (-) | True | G274810 |
| XM_034312863.1 | mRNA | downstream | 23228 | 24259708 ~ 24274253 (-) | True | lin54 |
| XM_034312864.1 | mRNA | downstream | 23228 | 24260402 ~ 24274253 (-) | False | lin54 |
| XM_026942695.2 | mRNA | downstream | 44169 | 24251548 ~ 24253312 (-) | True | inip |
| XM_034312396.1 | mRNA | downstream | 103608 | 24118023 ~ 24193873 (-) | False | LOC113543977 |
| XM_026942732.2 | mRNA | upstream | 5448 | 24306452 ~ 24309825 (-) | True | srek1ip1 |
| XM_026942731.2 | mRNA | upstream | 5448 | 24306452 ~ 24309793 (-) | False | srek1ip1 |
| XM_034312579.1 | mRNA | upstream | 77181 | 24378185 ~ 24454955 (-) | True | adamts6 |
| XM_034312585.1 | mRNA | upstream | 164093 | 24465097 ~ 24477076 (-) | True | trim23 |
| XM_026942651.2 | mRNA | upstream | 199858 | 24500862 ~ 24509560 (-) | False | sgtb |
| TU325209 | other | downstream | 44175 | 24251603 ~ 24253306 (-) | False | inip |
| TU325032 | other | downstream | 434213 | 23861998 ~ 23863268 (-) | False | nrarpa |
| TU325027 | other | downstream | 495197 | 23798359 ~ 23802284 (-) | True | G274342 |
| XR_004579778.1 | other | downstream | 3090311 | 21189969 ~ 21207170 (-) | False | LOC113544130 |
| TU322970 | other | downstream | 4216570 | 20079415 ~ 20080911 (-) | True | G272551 |
