Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026942838.2 |
| length | 577 |
| RNA type | mRNA |
| GC content | 0.45 |
| exon number | 5 |
| gene id | LOC113544170 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 24297476 ~ 24301032 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU325222 | lncRNA | downstream | 49919 | 24245196 ~ 24247557 (-) | True | G274489 |
| XR_004579775.1 | lncRNA | downstream | 79798 | 24216715 ~ 24217678 (-) | True | LOC113543934 |
| XR_004579785.1 | lncRNA | downstream | 171269 | 24125158 ~ 24126207 (-) | True | LOC117599329 |
| TU325121 | lncRNA | downstream | 188028 | 24108470 ~ 24109448 (-) | True | G274425 |
| TU325115 | lncRNA | downstream | 193374 | 24103011 ~ 24104102 (-) | True | G274421 |
| TU325539 | lncRNA | upstream | 190434 | 24491466 ~ 24492114 (-) | True | G274771 |
| TU325551 | lncRNA | upstream | 212256 | 24513288 ~ 24651673 (-) | True | G274781 |
| TU325584 | lncRNA | upstream | 245168 | 24546200 ~ 24547152 (-) | True | G274804 |
| TU325610 | lncRNA | upstream | 263610 | 24564642 ~ 24606916 (-) | False | G274810 |
| TU325607 | lncRNA | upstream | 266948 | 24567980 ~ 24617704 (-) | True | G274810 |
| XM_034312863.1 | mRNA | downstream | 23223 | 24259708 ~ 24274253 (-) | True | lin54 |
| XM_034312864.1 | mRNA | downstream | 23223 | 24260402 ~ 24274253 (-) | False | lin54 |
| XM_026942695.2 | mRNA | downstream | 44164 | 24251548 ~ 24253312 (-) | True | inip |
| XM_034312394.1 | mRNA | downstream | 103605 | 24118023 ~ 24193871 (-) | False | LOC113543977 |
| XM_026942732.2 | mRNA | upstream | 5420 | 24306452 ~ 24309825 (-) | True | srek1ip1 |
| XM_026942731.2 | mRNA | upstream | 5420 | 24306452 ~ 24309793 (-) | False | srek1ip1 |
| XM_034312579.1 | mRNA | upstream | 77153 | 24378185 ~ 24454955 (-) | True | adamts6 |
| XM_034312585.1 | mRNA | upstream | 164065 | 24465097 ~ 24477076 (-) | True | trim23 |
| XM_026942651.2 | mRNA | upstream | 199830 | 24500862 ~ 24509560 (-) | False | sgtb |
| TU325209 | other | downstream | 44170 | 24251603 ~ 24253306 (-) | False | inip |
| TU325032 | other | downstream | 434208 | 23861998 ~ 23863268 (-) | False | nrarpa |
| TU325027 | other | downstream | 495192 | 23798359 ~ 23802284 (-) | True | G274342 |
| XR_004579778.1 | other | downstream | 3090306 | 21189969 ~ 21207170 (-) | False | LOC113544130 |
| TU322970 | other | downstream | 4216565 | 20079415 ~ 20080911 (-) | True | G272551 |
