Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU325601 |
| length | 226 |
| lncRNA type | inter_gene |
| GC content | 0.38 |
| exon number | 2 |
| gene id | G274808 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 24596220 ~ 24678758 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU325619 | lncRNA | downstream | 7902 | 24591240 ~ 24591960 (-) | True | G274819 |
| TU325584 | lncRNA | downstream | 52710 | 24546200 ~ 24547152 (-) | True | G274804 |
| TU325539 | lncRNA | downstream | 107748 | 24491466 ~ 24492114 (-) | True | G274771 |
| TU325222 | lncRNA | downstream | 352305 | 24245196 ~ 24247557 (-) | True | G274489 |
| XR_004579775.1 | lncRNA | downstream | 382184 | 24216715 ~ 24217678 (-) | True | LOC113543934 |
| TU325639 | lncRNA | upstream | 35878 | 24694573 ~ 24696111 (-) | True | G274837 |
| TU325645 | lncRNA | upstream | 60236 | 24718931 ~ 24719131 (-) | True | G274841 |
| TU325669 | lncRNA | upstream | 90950 | 24749645 ~ 24749854 (-) | True | G274856 |
| TU325670 | lncRNA | upstream | 96485 | 24755180 ~ 24755382 (-) | True | G274857 |
| TU325671 | lncRNA | upstream | 121424 | 24780119 ~ 24780386 (-) | True | G274858 |
| XM_026942651.2 | mRNA | downstream | 90302 | 24500862 ~ 24509560 (-) | False | sgtb |
| XM_026942652.2 | mRNA | downstream | 90382 | 24500862 ~ 24509480 (-) | False | sgtb |
| XM_026942649.2 | mRNA | downstream | 90484 | 24500862 ~ 24509378 (-) | False | sgtb |
| XM_026942650.2 | mRNA | downstream | 91416 | 24500862 ~ 24508446 (-) | True | sgtb |
| XM_034312585.1 | mRNA | downstream | 122786 | 24465097 ~ 24477076 (-) | True | trim23 |
| XM_034312446.1 | mRNA | upstream | 113 | 24658808 ~ 24697852 (-) | True | smc5 |
| XM_034312447.1 | mRNA | upstream | 40096 | 24698791 ~ 24718235 (-) | True | mamdc2b |
| XM_034312575.1 | mRNA | upstream | 74853 | 24733548 ~ 24749451 (-) | True | tjp2a |
| XM_026911830.2 | mRNA | upstream | 102521 | 24761216 ~ 24777827 (-) | True | pip5k1ba |
| XM_034312576.1 | mRNA | upstream | 134859 | 24793554 ~ 24797730 (-) | True | actr1 |
| TU325248 | other | downstream | 298858 | 24297481 ~ 24301004 (-) | False | LOC113544170 |
| TU325209 | other | downstream | 346556 | 24251603 ~ 24253306 (-) | False | inip |
| TU325032 | other | downstream | 736594 | 23861998 ~ 23863268 (-) | False | nrarpa |
| TU325027 | other | downstream | 797578 | 23798359 ~ 23802284 (-) | True | G274342 |
| XR_004579778.1 | other | downstream | 3392692 | 21189969 ~ 21207170 (-) | False | LOC113544130 |
