Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU325619 |
| length | 362 |
| lncRNA type | inter_gene |
| GC content | 0.55 |
| exon number | 3 |
| gene id | G274819 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 24591240 ~ 24591960 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU325584 | lncRNA | downstream | 44088 | 24546200 ~ 24547152 (-) | True | G274804 |
| TU325539 | lncRNA | downstream | 99126 | 24491466 ~ 24492114 (-) | True | G274771 |
| TU325222 | lncRNA | downstream | 343683 | 24245196 ~ 24247557 (-) | True | G274489 |
| XR_004579775.1 | lncRNA | downstream | 373562 | 24216715 ~ 24217678 (-) | True | LOC113543934 |
| XR_004579785.1 | lncRNA | downstream | 465033 | 24125158 ~ 24126207 (-) | True | LOC117599329 |
| TU325592 | lncRNA | upstream | 4260 | 24596220 ~ 24658695 (-) | False | G274808 |
| TU325599 | lncRNA | upstream | 7902 | 24599862 ~ 24658695 (-) | False | G274808 |
| TU325601 | lncRNA | upstream | 7902 | 24599862 ~ 24658695 (-) | False | G274808 |
| TU325634 | lncRNA | upstream | 44940 | 24636900 ~ 24637430 (-) | True | G274833 |
| TU325589 | lncRNA | upstream | 65330 | 24657290 ~ 24676505 (-) | True | G274808 |
| XM_026942651.2 | mRNA | downstream | 81680 | 24500862 ~ 24509560 (-) | False | sgtb |
| XM_026942652.2 | mRNA | downstream | 81760 | 24500862 ~ 24509480 (-) | False | sgtb |
| XM_026942649.2 | mRNA | downstream | 81862 | 24500862 ~ 24509378 (-) | False | sgtb |
| XM_026942650.2 | mRNA | downstream | 82794 | 24500862 ~ 24508446 (-) | True | sgtb |
| XM_034312585.1 | mRNA | downstream | 114164 | 24465097 ~ 24477076 (-) | True | trim23 |
| XM_034312446.1 | mRNA | upstream | 66848 | 24658808 ~ 24697852 (-) | True | smc5 |
| XM_034312447.1 | mRNA | upstream | 106831 | 24698791 ~ 24718235 (-) | True | mamdc2b |
| XM_034312575.1 | mRNA | upstream | 141588 | 24733548 ~ 24749451 (-) | True | tjp2a |
| XM_026911830.2 | mRNA | upstream | 169256 | 24761216 ~ 24777827 (-) | True | pip5k1ba |
| XM_034312576.1 | mRNA | upstream | 201594 | 24793554 ~ 24797730 (-) | True | actr1 |
| TU325248 | other | downstream | 290236 | 24297481 ~ 24301004 (-) | False | LOC113544170 |
| TU325209 | other | downstream | 337934 | 24251603 ~ 24253306 (-) | False | inip |
| TU325032 | other | downstream | 727972 | 23861998 ~ 23863268 (-) | False | nrarpa |
| TU325027 | other | downstream | 788956 | 23798359 ~ 23802284 (-) | True | G274342 |
| XR_004579778.1 | other | downstream | 3384070 | 21189969 ~ 21207170 (-) | False | LOC113544130 |
