Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034312304.1 |
| length | 1076 |
| RNA type | mRNA |
| GC content | 0.44 |
| exon number | 5 |
| gene id | ponzr2 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 1411986 ~ 1419489 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU309950 | lncRNA | upstream | 80518 | 1333782 ~ 1333986 (+) | True | G261585 |
| TU309909 | lncRNA | upstream | 150364 | 1263307 ~ 1264140 (+) | True | G261544 |
| TU309899 | lncRNA | upstream | 165823 | 1241824 ~ 1248681 (+) | True | G261534 |
| TU309901 | lncRNA | upstream | 167893 | 1245800 ~ 1246611 (+) | True | G261536 |
| TU309871 | lncRNA | upstream | 200008 | 1203000 ~ 1214496 (+) | True | G261510 |
| TU309975 | lncRNA | downstream | 8661 | 1428150 ~ 1487270 (+) | False | LOC113524197 |
| TU309973 | lncRNA | downstream | 32610 | 1452099 ~ 1507489 (+) | False | LOC113524197 |
| TU309969 | lncRNA | downstream | 46079 | 1465568 ~ 1471657 (+) | False | LOC113524197 |
| TU309972 | lncRNA | downstream | 46079 | 1465568 ~ 1470922 (+) | True | LOC113524197 |
| XR_003402517.2 | lncRNA | downstream | 51132 | 1470621 ~ 1510087 (+) | False | LOC113524197 |
| XM_026910307.2 | mRNA | upstream | 5670 | 1401549 ~ 1408834 (+) | True | cldn7b |
| XM_034312493.1 | mRNA | upstream | 27104 | 1360710 ~ 1387400 (+) | True | fgf11b |
| XM_026910332.2 | mRNA | upstream | 286252 | 1119530 ~ 1128252 (+) | True | pcolcea |
| XM_026910335.2 | mRNA | upstream | 302522 | 1101801 ~ 1111982 (+) | False | vamp2 |
| XM_026910334.2 | mRNA | upstream | 320171 | 1092079 ~ 1094333 (+) | True | and3 |
| XM_026910312.2 | mRNA | downstream | 882 | 1420371 ~ 1423465 (+) | True | LOC113524161 |
| XM_026910298.2 | mRNA | downstream | 30669 | 1450158 ~ 1461224 (+) | True | tlx3b |
| XM_034312431.1 | mRNA | downstream | 93075 | 1512564 ~ 1523146 (+) | True | LOC113524165 |
| XM_026910354.2 | mRNA | downstream | 132779 | 1552268 ~ 1553689 (+) | True | LOC113524200 |
| XM_034312266.1 | mRNA | downstream | 393110 | 1812599 ~ 1826322 (+) | False | fgf18b |
| TU309863 | other | upstream | 177372 | 1205991 ~ 1237132 (+) | True | G261503 |
| TU309774 | other | upstream | 302226 | 1101789 ~ 1112278 (+) | True | vamp2 |
| trnal-aag_10 | other | upstream | 315051 | 1099372 ~ 1099453 (+) | True | trnal-aag_10 |
| trnal-uag_7 | other | upstream | 319572 | 1094851 ~ 1094932 (+) | True | trnal-uag_7 |
| TU309447 | other | upstream | 686779 | 725827 ~ 727725 (+) | True | G261178 |
| XR_004579857.1 | other | downstream | 924172 | 2343661 ~ 2347385 (+) | True | LOC117599403 |
| TU311007 | other | downstream | 1376059 | 2795548 ~ 2817258 (+) | False | pcp4a |
| TU312620 | other | downstream | 3658392 | 5077881 ~ 5080617 (+) | False | triap1 |
| TU313203 | other | downstream | 4589311 | 6008800 ~ 6011902 (+) | True | G264336 |
| TU313925 | other | downstream | 5647382 | 7066871 ~ 7082441 (+) | True | G264948 |
