Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026942706.2 |
| length | 897 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 6 |
| gene id | rbm18 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 23104677 ~ 23121707 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0003723 | RNA binding | molecular_function |
| id | description |
|---|---|
| K24527 | RBM18; RNA-binding protein 18 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004579810.1 | lncRNA | upstream | 30739 | 23068937 ~ 23073938 (+) | True | LOC117599346 |
| TU324237 | lncRNA | upstream | 42332 | 23047921 ~ 23062345 (+) | True | G273644 |
| TU324287 | lncRNA | upstream | 66061 | 23037409 ~ 23038616 (+) | True | G273683 |
| XR_004579839.1 | lncRNA | upstream | 109880 | 22992542 ~ 22994797 (+) | True | LOC117599377 |
| TU324282 | lncRNA | upstream | 110167 | 22992556 ~ 22994510 (+) | False | LOC117599377 |
| TU324327 | lncRNA | downstream | 13872 | 23135579 ~ 23135832 (+) | True | G273719 |
| TU324488 | lncRNA | downstream | 139339 | 23261046 ~ 23279789 (+) | False | G273865 |
| TU324489 | lncRNA | downstream | 148441 | 23270148 ~ 23279789 (+) | True | G273865 |
| TU324487 | lncRNA | downstream | 153115 | 23274822 ~ 23277850 (+) | False | G273865 |
| TU324506 | lncRNA | downstream | 164293 | 23286000 ~ 23333549 (+) | True | G273880 |
| XM_026942730.2 | mRNA | upstream | 59599 | 23040466 ~ 23045078 (+) | True | paqr3b |
| XM_026942766.2 | mRNA | upstream | 65128 | 23019928 ~ 23039549 (+) | True | antxr2b |
| XM_026942840.2 | mRNA | upstream | 88451 | 23005005 ~ 23016226 (+) | True | rasgef1bb |
| XM_026942841.2 | mRNA | upstream | 89449 | 23005004 ~ 23015228 (+) | False | rasgef1bb |
| XM_026942550.2 | mRNA | upstream | 147076 | 22948893 ~ 22957601 (+) | True | snx18b |
| XM_026942809.2 | mRNA | downstream | 3645 | 23125352 ~ 23145567 (+) | False | lhx6 |
| XM_026942810.2 | mRNA | downstream | 3645 | 23125352 ~ 23145567 (+) | False | lhx6 |
| XM_026942812.2 | mRNA | downstream | 4562 | 23126269 ~ 23145567 (+) | True | lhx6 |
| XM_026942850.2 | mRNA | downstream | 42002 | 23163709 ~ 23169517 (+) | True | ndufa8 |
| XM_026942477.2 | mRNA | downstream | 98438 | 23220145 ~ 23232035 (+) | True | si:ch211-243g18.2 |
| XR_003404475.2 | other | upstream | 439107 | 22622428 ~ 22665570 (+) | True | lrrtm4l1 |
| TU323909 | other | upstream | 729802 | 22369274 ~ 22374875 (+) | False | tmem230a |
| TU323423 | other | upstream | 1625797 | 21476112 ~ 21478880 (+) | True | LOC113543995 |
| TU322810 | other | upstream | 2561723 | 20540325 ~ 20542954 (+) | True | G272408 |
| TU322768 | other | upstream | 2675534 | 20423399 ~ 20429143 (+) | True | G272374 |
| TU324289 | other | downstream | 3660 | 23125367 ~ 23129320 (+) | False | lhx6 |
| TU324492 | other | downstream | 143746 | 23265453 ~ 23274170 (+) | False | rc3h2 |
| TU324491 | other | downstream | 199864 | 23321571 ~ 23360503 (+) | False | LOC113543986 |
| TU324879 | other | downstream | 981382 | 24103089 ~ 24104595 (+) | False | hsdl2 |
| TU325154 | other | downstream | 1105674 | 24227381 ~ 24228678 (+) | False | LOC117599389 |
