Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026942730.2 |
| length | 1258 |
| RNA type | mRNA |
| GC content | 0.52 |
| exon number | 7 |
| gene id | paqr3b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 23040466 ~ 23045078 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU324287 | lncRNA | upstream | 1850 | 23037409 ~ 23038616 (+) | True | G273683 |
| XR_004579839.1 | lncRNA | upstream | 45669 | 22992542 ~ 22994797 (+) | True | LOC117599377 |
| TU324282 | lncRNA | upstream | 45956 | 22992556 ~ 22994510 (+) | False | LOC117599377 |
| TU324179 | lncRNA | upstream | 200346 | 22801081 ~ 22840120 (+) | True | G273600 |
| TU324041 | lncRNA | upstream | 478141 | 22562104 ~ 22562325 (+) | True | G273473 |
| TU324237 | lncRNA | downstream | 2843 | 23047921 ~ 23062345 (+) | True | G273644 |
| TU324290 | lncRNA | downstream | 4734 | 23049812 ~ 23126603 (+) | False | lhx6 |
| XR_004579810.1 | lncRNA | downstream | 23859 | 23068937 ~ 23073938 (+) | True | LOC117599346 |
| TU324327 | lncRNA | downstream | 90501 | 23135579 ~ 23135832 (+) | True | G273719 |
| TU324488 | lncRNA | downstream | 215968 | 23261046 ~ 23279789 (+) | False | G273865 |
| XM_026942766.2 | mRNA | upstream | 917 | 23019928 ~ 23039549 (+) | True | antxr2b |
| XM_026942840.2 | mRNA | upstream | 24240 | 23005005 ~ 23016226 (+) | True | rasgef1bb |
| XM_026942841.2 | mRNA | upstream | 25238 | 23005004 ~ 23015228 (+) | False | rasgef1bb |
| XM_026942550.2 | mRNA | upstream | 82865 | 22948893 ~ 22957601 (+) | True | snx18b |
| XM_026942775.2 | mRNA | upstream | 176636 | 22852481 ~ 22863830 (+) | True | fstb |
| XM_026942706.2 | mRNA | downstream | 59599 | 23104677 ~ 23121707 (+) | True | rbm18 |
| XM_026942809.2 | mRNA | downstream | 80274 | 23125352 ~ 23145567 (+) | False | lhx6 |
| XM_026942810.2 | mRNA | downstream | 80274 | 23125352 ~ 23145567 (+) | False | lhx6 |
| XM_026942812.2 | mRNA | downstream | 81191 | 23126269 ~ 23145567 (+) | True | lhx6 |
| XM_026942850.2 | mRNA | downstream | 118631 | 23163709 ~ 23169517 (+) | True | ndufa8 |
| XR_003404475.2 | other | upstream | 374896 | 22622428 ~ 22665570 (+) | True | lrrtm4l1 |
| TU323909 | other | upstream | 665591 | 22369274 ~ 22374875 (+) | False | tmem230a |
| TU323423 | other | upstream | 1561586 | 21476112 ~ 21478880 (+) | True | LOC113543995 |
| TU322810 | other | upstream | 2497512 | 20540325 ~ 20542954 (+) | True | G272408 |
| TU322768 | other | upstream | 2611323 | 20423399 ~ 20429143 (+) | True | G272374 |
| TU324289 | other | downstream | 80289 | 23125367 ~ 23129320 (+) | False | lhx6 |
| TU324492 | other | downstream | 220375 | 23265453 ~ 23274170 (+) | False | rc3h2 |
| TU324491 | other | downstream | 276493 | 23321571 ~ 23360503 (+) | False | LOC113543986 |
| TU324879 | other | downstream | 1058011 | 24103089 ~ 24104595 (+) | False | hsdl2 |
| TU325154 | other | downstream | 1182303 | 24227381 ~ 24228678 (+) | False | LOC117599389 |
