Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_026942819.2 |
| length | 1112 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 7 |
| gene id | fam166b |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 21188099 ~ 21195036 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU323264 | lncRNA | upstream | 197548 | 20990343 ~ 20990551 (+) | True | G272803 |
| TU323226 | lncRNA | upstream | 256516 | 20927622 ~ 20931583 (+) | True | G272770 |
| TU322887 | lncRNA | upstream | 438452 | 20749361 ~ 20749647 (+) | True | G272470 |
| TU322859 | lncRNA | upstream | 450599 | 20716511 ~ 20737500 (+) | True | G272450 |
| TU322857 | lncRNA | upstream | 462905 | 20659603 ~ 20725194 (+) | True | G272448 |
| TU323409 | lncRNA | downstream | 164513 | 21359549 ~ 21361642 (+) | False | LOC113544125 |
| TU323425 | lncRNA | downstream | 284864 | 21479900 ~ 21488039 (+) | False | G272940 |
| TU323426 | lncRNA | downstream | 284864 | 21479900 ~ 21488039 (+) | True | G272940 |
| TU323428 | lncRNA | downstream | 290115 | 21485151 ~ 21492672 (+) | False | G272940 |
| XR_003404485.2 | lncRNA | downstream | 293076 | 21488112 ~ 21492076 (+) | True | LOC113544190 |
| XM_026942794.2 | mRNA | upstream | 20557 | 21151369 ~ 21167542 (+) | True | rnf208 |
| XM_026942754.2 | mRNA | upstream | 40866 | 21129286 ~ 21147233 (+) | True | slc5a1 |
| XM_026942755.2 | mRNA | upstream | 40866 | 21131556 ~ 21147233 (+) | False | slc5a1 |
| XM_026942802.2 | mRNA | upstream | 72995 | 21108658 ~ 21115104 (+) | True | ywhah |
| XM_026942639.2 | mRNA | upstream | 81273 | 21074653 ~ 21106826 (+) | True | depdc5 |
| XM_026942487.2 | mRNA | downstream | 132070 | 21327106 ~ 21335938 (+) | True | stoml2 |
| XM_026942771.2 | mRNA | downstream | 142199 | 21337235 ~ 21349823 (+) | True | pigo |
| XM_026942773.2 | mRNA | downstream | 142199 | 21337235 ~ 21349823 (+) | False | pigo |
| XM_026942774.2 | mRNA | downstream | 164483 | 21359519 ~ 21361744 (+) | True | LOC113544125 |
| XM_026942484.2 | mRNA | downstream | 198785 | 21393821 ~ 21424847 (+) | True | phf24 |
| TU322810 | other | upstream | 645145 | 20540325 ~ 20542954 (+) | True | G272408 |
| TU322768 | other | upstream | 758956 | 20423399 ~ 20429143 (+) | True | G272374 |
| TU322750 | other | upstream | 789152 | 20398280 ~ 20398947 (+) | True | G272367 |
| trnae-cuc_36 | other | upstream | 1339273 | 19848755 ~ 19848826 (+) | True | trnae-cuc_36 |
| XR_004579782.1 | other | upstream | 1357831 | 19825962 ~ 19830268 (+) | False | LOC117599326 |
| TU323423 | other | downstream | 281076 | 21476112 ~ 21478880 (+) | True | LOC113543995 |
| TU323909 | other | downstream | 1174238 | 22369274 ~ 22374875 (+) | False | tmem230a |
| XR_003404475.2 | other | downstream | 1427392 | 22622428 ~ 22665570 (+) | True | lrrtm4l1 |
| TU324289 | other | downstream | 1930331 | 23125367 ~ 23129320 (+) | False | lhx6 |
| TU324492 | other | downstream | 2070417 | 23265453 ~ 23274170 (+) | False | rc3h2 |
