Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034312438.1 |
| length | 1067 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 7 |
| gene id | setd9 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 5717115 ~ 5722706 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU312825 | lncRNA | upstream | 12284 | 5702843 ~ 5704831 (+) | True | G264002 |
| TU312815 | lncRNA | upstream | 143835 | 5572964 ~ 5573280 (+) | True | G263993 |
| TU312774 | lncRNA | upstream | 511696 | 5204995 ~ 5205419 (+) | True | G263953 |
| TU312598 | lncRNA | upstream | 691607 | 5023275 ~ 5025508 (+) | True | G263801 |
| TU312488 | lncRNA | upstream | 830314 | 4885346 ~ 4886801 (+) | True | G263716 |
| TU312899 | lncRNA | downstream | 199604 | 5922310 ~ 5926306 (+) | True | G264056 |
| TU313350 | lncRNA | downstream | 451608 | 6174314 ~ 6174692 (+) | True | G264424 |
| TU313337 | lncRNA | downstream | 471368 | 6194074 ~ 6194681 (+) | False | LOC113544903 |
| TU313352 | lncRNA | downstream | 472222 | 6194928 ~ 6195142 (+) | True | G264426 |
| TU313353 | lncRNA | downstream | 485284 | 6207990 ~ 6209011 (+) | True | G264427 |
| XM_034312602.1 | mRNA | upstream | 15937 | 5664084 ~ 5701178 (+) | True | LOC113544765 |
| XM_034312603.1 | mRNA | upstream | 15937 | 5664084 ~ 5701178 (+) | False | LOC113544765 |
| XM_026943670.2 | mRNA | upstream | 56973 | 5652719 ~ 5660142 (+) | True | wu:fb59d01 |
| XM_026943897.2 | mRNA | upstream | 67661 | 5645871 ~ 5649454 (+) | True | nxnl2 |
| XM_026943935.2 | mRNA | upstream | 77534 | 5627430 ~ 5639581 (+) | False | LOC113544883 |
| XM_026943660.2 | mRNA | downstream | 19525 | 5742231 ~ 5759098 (+) | True | grk5 |
| XM_026943662.2 | mRNA | downstream | 19525 | 5742231 ~ 5759098 (+) | False | grk5 |
| XM_026943924.2 | mRNA | downstream | 54030 | 5776736 ~ 5781428 (+) | True | pnx |
| XM_026943960.2 | mRNA | downstream | 61262 | 5783968 ~ 5796488 (+) | True | aebp1 |
| XM_034312327.1 | mRNA | downstream | 74435 | 5797141 ~ 5806497 (+) | True | ykt6 |
| TU312620 | other | upstream | 636498 | 5077881 ~ 5080617 (+) | False | triap1 |
| TU311007 | other | upstream | 2899857 | 2795548 ~ 2817258 (+) | False | pcp4a |
| XR_004579857.1 | other | upstream | 3369730 | 2343661 ~ 2347385 (+) | True | LOC117599403 |
| XR_004579765.1 | other | upstream | 4297626 | 1414504 ~ 1419489 (+) | False | ponzr2 |
| TU313203 | other | downstream | 286094 | 6008800 ~ 6011902 (+) | True | G264336 |
| TU313925 | other | downstream | 1344165 | 7066871 ~ 7082441 (+) | True | G264948 |
| TU313944 | other | downstream | 1393354 | 7116060 ~ 7118616 (+) | False | ddx55 |
| trnar-ccu_6 | other | downstream | 1645774 | 7368480 ~ 7368552 (+) | True | trnar-ccu_6 |
| trnam-cau_30 | other | downstream | 1645856 | 7368562 ~ 7368633 (+) | True | trnam-cau_30 |
