Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034312373.1 |
| length | 1011 |
| RNA type | mRNA |
| GC content | 0.40 |
| exon number | 4 |
| gene id | LOC113544858 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 6165896 ~ 6168964 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU312899 | lncRNA | upstream | 239590 | 5922310 ~ 5926306 (+) | True | G264056 |
| TU312835 | lncRNA | upstream | 438951 | 5667582 ~ 5726945 (+) | True | G264009 |
| TU312825 | lncRNA | upstream | 461065 | 5702843 ~ 5704831 (+) | True | G264002 |
| TU312815 | lncRNA | upstream | 592616 | 5572964 ~ 5573280 (+) | True | G263993 |
| TU312774 | lncRNA | upstream | 960477 | 5204995 ~ 5205419 (+) | True | G263953 |
| TU313350 | lncRNA | downstream | 5350 | 6174314 ~ 6174692 (+) | True | G264424 |
| TU313337 | lncRNA | downstream | 25110 | 6194074 ~ 6194681 (+) | False | LOC113544903 |
| TU313352 | lncRNA | downstream | 25964 | 6194928 ~ 6195142 (+) | True | G264426 |
| TU313353 | lncRNA | downstream | 39026 | 6207990 ~ 6209011 (+) | True | G264427 |
| TU313354 | lncRNA | downstream | 49545 | 6218509 ~ 6283930 (+) | True | G264428 |
| XM_026943722.2 | mRNA | upstream | 944 | 6148993 ~ 6164952 (+) | True | sbno1 |
| XM_026943723.2 | mRNA | upstream | 944 | 6148993 ~ 6164952 (+) | False | sbno1 |
| XM_026943725.2 | mRNA | upstream | 944 | 6148993 ~ 6164952 (+) | False | sbno1 |
| XM_026943726.2 | mRNA | upstream | 944 | 6148993 ~ 6164952 (+) | False | sbno1 |
| XM_026943724.2 | mRNA | upstream | 944 | 6148993 ~ 6164952 (+) | False | sbno1 |
| XM_026943971.2 | mRNA | downstream | 929 | 6169893 ~ 6194356 (+) | True | LOC113544903 |
| XM_026943972.2 | mRNA | downstream | 929 | 6169893 ~ 6191088 (+) | False | LOC113544903 |
| XM_034312810.1 | mRNA | downstream | 28315 | 6197279 ~ 6253031 (+) | True | LOC113544768 |
| XM_034312816.1 | mRNA | downstream | 28315 | 6197279 ~ 6253031 (+) | False | LOC113544768 |
| XM_034312814.1 | mRNA | downstream | 28315 | 6197279 ~ 6253031 (+) | False | LOC113544768 |
| TU313203 | other | upstream | 153994 | 6008800 ~ 6011902 (+) | True | G264336 |
| TU312620 | other | upstream | 1085279 | 5077881 ~ 5080617 (+) | False | triap1 |
| TU311007 | other | upstream | 3348638 | 2795548 ~ 2817258 (+) | False | pcp4a |
| XR_004579857.1 | other | upstream | 3818511 | 2343661 ~ 2347385 (+) | True | LOC117599403 |
| XR_004579764.1 | other | upstream | 4746461 | 1414504 ~ 1419435 (+) | False | ponzr2 |
| TU313925 | other | downstream | 897907 | 7066871 ~ 7082441 (+) | True | G264948 |
| TU313944 | other | downstream | 947096 | 7116060 ~ 7118616 (+) | False | ddx55 |
| trnar-ccu_6 | other | downstream | 1199516 | 7368480 ~ 7368552 (+) | True | trnar-ccu_6 |
| trnam-cau_30 | other | downstream | 1199598 | 7368562 ~ 7368633 (+) | True | trnam-cau_30 |
| trnar-ccu_7 | other | downstream | 1200299 | 7369263 ~ 7369335 (+) | True | trnar-ccu_7 |
