Item | Value |
---|---|
RNA id | XM_034312447.1 |
length | 4003 |
RNA type | mRNA |
GC content | 0.46 |
exon number | 14 |
gene id | mamdc2b |
representative | True |
Item | Value |
---|---|
chromosome id | NC_047611.1 |
NCBI id | CM018557.1 |
chromosome length | 24879021 |
location | 24698791 ~ 24718235 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU325639 | lncRNA | downstream | 2680 | 24694573 ~ 24696111 (-) | True | G274837 |
TU325596 | lncRNA | downstream | 20033 | 24657290 ~ 24678758 (-) | False | G274808 |
TU325589 | lncRNA | downstream | 22286 | 24657290 ~ 24676505 (-) | True | G274808 |
TU325597 | lncRNA | downstream | 25729 | 24657290 ~ 24673062 (-) | False | G274808 |
TU325592 | lncRNA | downstream | 40096 | 24596220 ~ 24658695 (-) | False | G274808 |
TU325645 | lncRNA | upstream | 696 | 24718931 ~ 24719131 (-) | True | G274841 |
TU325669 | lncRNA | upstream | 31410 | 24749645 ~ 24749854 (-) | True | G274856 |
TU325670 | lncRNA | upstream | 36945 | 24755180 ~ 24755382 (-) | True | G274857 |
TU325671 | lncRNA | upstream | 61884 | 24780119 ~ 24780386 (-) | True | G274858 |
TU325672 | lncRNA | upstream | 62726 | 24780961 ~ 24781675 (-) | True | G274859 |
XM_034312446.1 | mRNA | downstream | 939 | 24658808 ~ 24697852 (-) | True | smc5 |
XM_026942651.2 | mRNA | downstream | 189231 | 24500862 ~ 24509560 (-) | False | sgtb |
XM_026942652.2 | mRNA | downstream | 189311 | 24500862 ~ 24509480 (-) | False | sgtb |
XM_026942649.2 | mRNA | downstream | 189413 | 24500862 ~ 24509378 (-) | False | sgtb |
XM_026942650.2 | mRNA | downstream | 190345 | 24500862 ~ 24508446 (-) | True | sgtb |
XM_034312575.1 | mRNA | upstream | 15313 | 24733548 ~ 24749451 (-) | True | tjp2a |
XM_026911830.2 | mRNA | upstream | 42981 | 24761216 ~ 24777827 (-) | True | pip5k1ba |
XM_034312576.1 | mRNA | upstream | 75319 | 24793554 ~ 24797730 (-) | True | actr1 |
XM_034312377.1 | mRNA | upstream | 88187 | 24806422 ~ 24808492 (-) | True | zgc:86599 |
XM_026911816.2 | mRNA | upstream | 92568 | 24810803 ~ 24844734 (-) | False | LOC113525332 |
TU325248 | other | downstream | 397787 | 24297481 ~ 24301004 (-) | False | LOC113544170 |
TU325209 | other | downstream | 445485 | 24251603 ~ 24253306 (-) | False | inip |
TU325032 | other | downstream | 835523 | 23861998 ~ 23863268 (-) | False | nrarpa |
TU325027 | other | downstream | 896507 | 23798359 ~ 23802284 (-) | True | G274342 |
XR_004579778.1 | other | downstream | 3491621 | 21189969 ~ 21207170 (-) | False | LOC113544130 |