Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_034312891.1 |
| length | 1149 |
| RNA type | mRNA |
| GC content | 0.39 |
| exon number | 3 |
| gene id | LOC113543668 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 14919053 ~ 14922087 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | description |
|---|---|
| K24830 | MINAR2; major intrinsically disordered Notch2-binding receptor 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU319183 | lncRNA | upstream | 56047 | 14860755 ~ 14863006 (+) | True | G269431 |
| TU319140 | lncRNA | upstream | 132858 | 14785647 ~ 14786195 (+) | True | G269396 |
| TU319137 | lncRNA | upstream | 135368 | 14782961 ~ 14783685 (+) | True | G269393 |
| XR_004579796.1 | lncRNA | upstream | 314690 | 14598607 ~ 14604363 (+) | True | LOC117599336 |
| TU318977 | lncRNA | upstream | 321235 | 14596964 ~ 14597818 (+) | True | G269268 |
| TU319360 | lncRNA | downstream | 206210 | 15128297 ~ 15157245 (+) | True | G269569 |
| TU319374 | lncRNA | downstream | 252181 | 15174268 ~ 15174492 (+) | True | G269583 |
| TU319438 | lncRNA | downstream | 356996 | 15279083 ~ 15289443 (+) | True | G269635 |
| TU319448 | lncRNA | downstream | 374457 | 15296544 ~ 15298327 (+) | True | G269641 |
| TU319449 | lncRNA | downstream | 374571 | 15296658 ~ 15298327 (+) | False | G269641 |
| XM_026942024.2 | mRNA | upstream | 94259 | 14821863 ~ 14824794 (+) | True | zgc:171929 |
| XM_026942025.2 | mRNA | upstream | 94259 | 14821863 ~ 14824794 (+) | False | zgc:171929 |
| XM_026942006.2 | mRNA | upstream | 122979 | 14788906 ~ 14796074 (+) | True | tpte |
| XM_026942008.2 | mRNA | upstream | 122979 | 14788906 ~ 14796074 (+) | False | tpte |
| XM_026942007.2 | mRNA | upstream | 122979 | 14789057 ~ 14796074 (+) | False | tpte |
| XM_026942065.2 | mRNA | downstream | 44083 | 14966170 ~ 14977527 (+) | True | LOC113543667 |
| XM_034312518.1 | mRNA | downstream | 57300 | 14979387 ~ 15042992 (+) | True | LOC113543506 |
| XM_034312505.1 | mRNA | downstream | 313181 | 15235268 ~ 15242258 (+) | False | c17h5orf63 |
| XM_026941988.2 | mRNA | downstream | 316723 | 15238810 ~ 15242258 (+) | False | c17h5orf63 |
| XM_026941989.2 | mRNA | downstream | 316843 | 15238930 ~ 15242258 (+) | True | c17h5orf63 |
| XR_004579771.1 | other | upstream | 147980 | 14762313 ~ 14771073 (+) | False | vps36 |
| XR_004579830.1 | other | upstream | 1602837 | 13315938 ~ 13316216 (+) | True | LOC113543571 |
| TU316249 | other | upstream | 4348348 | 10569028 ~ 10570705 (+) | True | G266868 |
| XR_004579824.1 | other | upstream | 5164463 | 9704360 ~ 9754590 (+) | False | dclk1a |
| XR_004579762.1 | other | upstream | 5494198 | 9420468 ~ 9424855 (+) | False | LOC113543674 |
| trnam-cau_35 | other | downstream | 1702822 | 16624909 ~ 16624980 (+) | True | trnam-cau_35 |
| trnar-ccu_8 | other | downstream | 1703313 | 16625400 ~ 16625472 (+) | True | trnar-ccu_8 |
| trnam-cau_36 | other | downstream | 1703395 | 16625482 ~ 16625553 (+) | True | trnam-cau_36 |
| trnar-ccu_9 | other | downstream | 1703886 | 16625973 ~ 16626045 (+) | True | trnar-ccu_9 |
| trnam-cau_37 | other | downstream | 1703968 | 16626055 ~ 16626126 (+) | True | trnam-cau_37 |
