Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_004579805.1 |
| length | 1172 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 4 |
| gene id | LOC113544905 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 7549590 ~ 7554579 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU314312 | lncRNA | upstream | 10268 | 7536855 ~ 7539322 (+) | True | G265270 |
| TU314001 | lncRNA | upstream | 50288 | 7495504 ~ 7499302 (+) | True | G265019 |
| XR_004579781.1 | lncRNA | upstream | 117247 | 7431362 ~ 7432343 (+) | True | LOC117599325 |
| TU314047 | lncRNA | upstream | 126579 | 7422770 ~ 7423011 (+) | True | G265053 |
| TU314046 | lncRNA | upstream | 129346 | 7420010 ~ 7420244 (+) | True | G265052 |
| TU314344 | lncRNA | downstream | 31032 | 7585611 ~ 7585902 (+) | True | G265294 |
| TU314376 | lncRNA | downstream | 82307 | 7636886 ~ 7638066 (+) | True | G265325 |
| TU314377 | lncRNA | downstream | 84399 | 7638978 ~ 7640736 (+) | True | G265326 |
| TU314379 | lncRNA | downstream | 104948 | 7659527 ~ 7661080 (+) | True | G265328 |
| TU314382 | lncRNA | downstream | 152821 | 7707400 ~ 7709793 (+) | True | G265331 |
| XM_034312378.1 | mRNA | upstream | 114664 | 7432541 ~ 7434926 (+) | True | LOC117599324 |
| XM_026943711.2 | mRNA | upstream | 156110 | 7384282 ~ 7393480 (+) | True | oclna |
| XM_034312853.1 | mRNA | upstream | 167602 | 7371076 ~ 7381988 (+) | False | marveld2a |
| XM_026943921.2 | mRNA | downstream | 63720 | 7618299 ~ 7620573 (+) | True | cryba4 |
| XM_026943872.2 | mRNA | downstream | 73502 | 7628081 ~ 7717349 (+) | True | grk3 |
| XM_026943758.2 | mRNA | downstream | 163476 | 7718055 ~ 7770444 (+) | True | LOC113544796 |
| XM_026943759.2 | mRNA | downstream | 163476 | 7718055 ~ 7770444 (+) | False | LOC113544796 |
| XM_034312496.1 | mRNA | downstream | 231099 | 7785678 ~ 7855941 (+) | False | LOC113544706 |
| trnam-cau_33 | other | upstream | 179251 | 7370268 ~ 7370339 (+) | True | trnam-cau_33 |
| trnam-cau_32 | other | upstream | 179712 | 7369807 ~ 7369878 (+) | True | trnam-cau_32 |
| trnam-cau_31 | other | upstream | 180174 | 7369345 ~ 7369416 (+) | True | trnam-cau_31 |
| trnar-ccu_7 | other | upstream | 180255 | 7369263 ~ 7369335 (+) | True | trnar-ccu_7 |
| trnam-cau_30 | other | upstream | 180957 | 7368562 ~ 7368633 (+) | True | trnam-cau_30 |
| TU314651 | other | downstream | 622087 | 8176666 ~ 8187611 (+) | False | tmem167a |
| XR_003404565.2 | other | downstream | 720468 | 8275047 ~ 8276323 (+) | True | LOC113544932 |
| XR_003404563.2 | other | downstream | 778892 | 8333471 ~ 8353841 (+) | False | LOC113544929 |
| XR_003404564.2 | other | downstream | 778911 | 8333490 ~ 8353841 (+) | False | LOC113544929 |
| TU314760 | other | downstream | 778923 | 8333502 ~ 8353815 (+) | False | LOC113544929 |
