Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnam-cau_38 |
| length | 72 |
| RNA type | tRNA |
| GC content | 0.60 |
| exon number | 1 |
| gene id | trnam-cau_38 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 16626804 ~ 16626875 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU320608 | lncRNA | upstream | 446 | 16625984 ~ 16626358 (+) | True | G270626 |
| TU320506 | lncRNA | upstream | 49564 | 16576363 ~ 16577240 (+) | True | G270536 |
| TU320489 | lncRNA | upstream | 116057 | 16510543 ~ 16510747 (+) | True | G270525 |
| TU320479 | lncRNA | upstream | 240872 | 16385030 ~ 16385932 (+) | True | G270520 |
| TU320453 | lncRNA | upstream | 275345 | 16351248 ~ 16351459 (+) | True | G270495 |
| TU320717 | lncRNA | downstream | 170970 | 16797845 ~ 16798435 (+) | True | G270716 |
| TU320859 | lncRNA | downstream | 434106 | 17060981 ~ 17078555 (+) | True | G270833 |
| TU320884 | lncRNA | downstream | 460520 | 17087395 ~ 17087922 (+) | True | G270856 |
| TU320889 | lncRNA | downstream | 472266 | 17099141 ~ 17101046 (+) | False | si:ch73-234b20.5 |
| TU320899 | lncRNA | downstream | 501142 | 17128017 ~ 17138981 (+) | True | G270870 |
| XM_026942067.2 | mRNA | upstream | 32407 | 16591893 ~ 16594397 (+) | True | LOC113543669 |
| XM_026941609.2 | mRNA | upstream | 36810 | 16583036 ~ 16589994 (+) | True | reep5 |
| XM_026941568.2 | mRNA | upstream | 74286 | 16538769 ~ 16552518 (+) | True | zgc:114200 |
| XM_026941909.2 | mRNA | upstream | 91861 | 16518234 ~ 16534943 (+) | True | tpm2 |
| XM_026941747.2 | mRNA | downstream | 43442 | 16670317 ~ 16744667 (+) | False | pam |
| XM_026941750.2 | mRNA | downstream | 43442 | 16670317 ~ 16744667 (+) | False | pam |
| XM_034312523.1 | mRNA | downstream | 43454 | 16670329 ~ 16744667 (+) | True | pam |
| XM_026941748.2 | mRNA | downstream | 47593 | 16674468 ~ 16744667 (+) | False | pam |
| XM_034312484.1 | mRNA | downstream | 122045 | 16748920 ~ 16787635 (+) | False | ppip5k2 |
| trnam-cau_37 | other | upstream | 678 | 16626055 ~ 16626126 (+) | True | trnam-cau_37 |
| trnar-ccu_9 | other | upstream | 759 | 16625973 ~ 16626045 (+) | True | trnar-ccu_9 |
| trnam-cau_36 | other | upstream | 1251 | 16625482 ~ 16625553 (+) | True | trnam-cau_36 |
| trnar-ccu_8 | other | upstream | 1332 | 16625400 ~ 16625472 (+) | True | trnar-ccu_8 |
| trnam-cau_35 | other | upstream | 1824 | 16624909 ~ 16624980 (+) | True | trnam-cau_35 |
| trnar-ccu_10 | other | downstream | 1867 | 16628742 ~ 16628814 (+) | True | trnar-ccu_10 |
| trnam-cau_39 | other | downstream | 1949 | 16628824 ~ 16628895 (+) | True | trnam-cau_39 |
| trnar-ccu_11 | other | downstream | 460793 | 17087668 ~ 17087740 (+) | True | trnar-ccu_11 |
| trnam-cau_40 | other | downstream | 460873 | 17087748 ~ 17087819 (+) | True | trnam-cau_40 |
| trnar-ccu_12 | other | downstream | 461574 | 17088449 ~ 17088521 (+) | True | trnar-ccu_12 |
