Gene
RNA
| Item | Value |
|---|---|
| RNA id | trnas-gcu_6 |
| length | 82 |
| RNA type | tRNA |
| GC content | 0.59 |
| exon number | 1 |
| gene id | trnas-gcu_6 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047611.1 |
| NCBI id | CM018557.1 |
| chromosome length | 24879021 |
| location | 1097798 ~ 1097879 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU310064 | lncRNA | downstream | 43775 | 969913 ~ 1054023 (-) | True | G261676 |
| TU310056 | lncRNA | downstream | 65263 | 981406 ~ 1032535 (-) | False | LOC117599327 |
| TU310051 | lncRNA | downstream | 87056 | 1009350 ~ 1010742 (-) | False | si:ch211-266i6.3 |
| TU310074 | lncRNA | downstream | 99497 | 997641 ~ 998301 (-) | True | G261686 |
| TU310075 | lncRNA | downstream | 99644 | 997641 ~ 998154 (-) | False | G261686 |
| XR_003402509.2 | lncRNA | upstream | 134484 | 1232363 ~ 1235521 (-) | True | LOC113524153 |
| TU310125 | lncRNA | upstream | 134525 | 1232404 ~ 1235474 (-) | False | LOC113524153 |
| TU310126 | lncRNA | upstream | 134597 | 1232476 ~ 1235474 (-) | False | LOC113524153 |
| TU310127 | lncRNA | upstream | 134597 | 1232476 ~ 1235021 (-) | False | LOC113524153 |
| TU310162 | lncRNA | upstream | 225301 | 1323180 ~ 1323407 (-) | True | G261748 |
| XM_034312326.1 | mRNA | downstream | 7267 | 1081869 ~ 1090531 (-) | True | ap4m1 |
| XM_034312743.1 | mRNA | downstream | 16509 | 1052951 ~ 1081289 (-) | True | foxo1b |
| XM_026910338.2 | mRNA | downstream | 68641 | 1015807 ~ 1029157 (-) | False | lhfpl6 |
| XM_034312788.1 | mRNA | downstream | 83509 | 1006914 ~ 1014289 (-) | True | si:ch211-266i6.3 |
| XM_034312318.1 | mRNA | downstream | 91596 | 999241 ~ 1006202 (-) | True | LOC113524167 |
| XM_026910339.2 | mRNA | upstream | 30700 | 1128579 ~ 1134162 (-) | True | tmem88a |
| XM_034312596.1 | mRNA | upstream | 41000 | 1138879 ~ 1159183 (-) | True | kdm6bb |
| XM_034312283.1 | mRNA | upstream | 105953 | 1203832 ~ 1230875 (-) | True | efnb3a |
| XM_034312282.1 | mRNA | upstream | 137662 | 1235541 ~ 1260050 (-) | False | gigyf1b |
| XM_034312281.1 | mRNA | upstream | 137662 | 1235541 ~ 1260050 (-) | False | gigyf1b |
| trnat-agu_11 | other | downstream | 2124 | 1095601 ~ 1095674 (-) | True | trnat-agu_11 |
| XR_004579767.1 | other | downstream | 577703 | 518930 ~ 520095 (-) | True | LOC117599315 |
| XR_003402518.2 | other | upstream | 298 | 1098177 ~ 1098309 (-) | True | LOC113524202 |
| XR_004579795.1 | other | upstream | 167576 | 1265455 ~ 1335692 (-) | False | nlgn2b |
| TU310379 | other | upstream | 677682 | 1775561 ~ 1780407 (-) | True | G261868 |
| TU311018 | other | upstream | 1581796 | 2679675 ~ 2760185 (-) | False | si:ch73-1a9.3 |
| TU311019 | other | upstream | 1581796 | 2679675 ~ 2760185 (-) | False | si:ch73-1a9.3 |
