Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU356488 |
| length | 448 |
| lncRNA type | sense_over |
| GC content | 0.34 |
| exon number | 1 |
| gene id | camkvb |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 2141522 ~ 2188917 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU356296 | lncRNA | upstream | 127825 | 2056405 ~ 2060641 (+) | False | mon1a |
| XR_003403969.2 | lncRNA | upstream | 166888 | 2007610 ~ 2021578 (+) | True | LOC113539753 |
| XR_004580183.1 | lncRNA | upstream | 178653 | 2007610 ~ 2009813 (+) | False | LOC113539753 |
| TU356299 | lncRNA | upstream | 244268 | 1943426 ~ 1944198 (+) | True | G300487 |
| TU356290 | lncRNA | upstream | 263999 | 1920527 ~ 1924467 (+) | True | G300479 |
| TU356498 | lncRNA | downstream | 5375 | 2194288 ~ 2195719 (+) | True | G300649 |
| XR_004580170.1 | lncRNA | downstream | 131134 | 2320047 ~ 2325625 (+) | True | LOC117599869 |
| TU356537 | lncRNA | downstream | 164931 | 2353844 ~ 2354096 (+) | True | G300688 |
| TU356538 | lncRNA | downstream | 166120 | 2355033 ~ 2355245 (+) | True | G300689 |
| XR_003403944.2 | lncRNA | downstream | 187059 | 2375972 ~ 2387101 (+) | True | LOC113539650 |
| XM_026935396.2 | mRNA | upstream | 99614 | 2062844 ~ 2088852 (+) | True | mst1rb |
| XM_034314432.1 | mRNA | upstream | 128481 | 2053083 ~ 2059985 (+) | True | mon1a |
| XM_034314431.1 | mRNA | upstream | 131860 | 2053083 ~ 2056606 (+) | False | mon1a |
| XM_026935221.2 | mRNA | upstream | 190031 | 1994213 ~ 1998435 (+) | False | inka1a |
| XM_026935222.2 | mRNA | upstream | 190031 | 1994502 ~ 1998435 (+) | True | inka1a |
| XM_026935167.2 | mRNA | downstream | 337806 | 2526719 ~ 2568406 (+) | True | LOC113539428 |
| XM_026935761.2 | mRNA | downstream | 389461 | 2578374 ~ 2607935 (+) | True | grm2b |
| XM_026935288.2 | mRNA | downstream | 432599 | 2621512 ~ 2629721 (+) | True | si:ch211-213o11.11 |
| XM_034314063.1 | mRNA | downstream | 436234 | 2625147 ~ 2629721 (+) | False | si:ch211-213o11.11 |
| XM_026935565.2 | mRNA | downstream | 446401 | 2635314 ~ 2641323 (+) | True | zgc:172270 |
| TU355411 | other | upstream | 689979 | 1496860 ~ 1498487 (+) | False | LOC117599925 |
| TU355413 | other | upstream | 690839 | 1496860 ~ 1497627 (+) | False | LOC117599925 |
| TU355179 | other | upstream | 1323578 | 863338 ~ 864888 (+) | False | fbxo42 |
| TU355161 | other | upstream | 1343655 | 842980 ~ 844811 (+) | False | LOC113539702 |
| XR_004580271.1 | other | upstream | 1667579 | 518567 ~ 520887 (+) | False | cdkn1a |
| TU358141 | other | downstream | 2278164 | 4467077 ~ 4469174 (+) | False | LOC113539599 |
| XR_003403967.2 | other | downstream | 4475161 | 6664074 ~ 6779358 (+) | False | cpne5b |
| XR_004580199.1 | other | downstream | 6312725 | 8501638 ~ 8558911 (+) | False | nfasca |
| XR_004580200.1 | other | downstream | 6312725 | 8501638 ~ 8558788 (+) | False | nfasca |
| TU362120 | other | downstream | 8323758 | 10512671 ~ 10513270 (+) | True | G305515 |
