Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU356639 |
| length | 836 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 2 |
| gene id | G300775 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 2906708 ~ 2908054 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU356715 | lncRNA | upstream | 169800 | 2736478 ~ 2736908 (+) | True | G300843 |
| TU356713 | lncRNA | upstream | 169847 | 2736478 ~ 2736861 (+) | False | G300843 |
| TU356712 | lncRNA | upstream | 170701 | 2735036 ~ 2736007 (+) | True | G300842 |
| TU356710 | lncRNA | upstream | 177101 | 2728484 ~ 2729607 (+) | True | G300841 |
| TU356709 | lncRNA | upstream | 179197 | 2727304 ~ 2727511 (+) | True | G300840 |
| XR_003403928.2 | lncRNA | downstream | 120886 | 3028940 ~ 3060846 (+) | True | LOC113539486 |
| TU357449 | lncRNA | downstream | 544617 | 3452671 ~ 3453505 (+) | True | G301487 |
| TU357469 | lncRNA | downstream | 613738 | 3521792 ~ 3530359 (+) | True | G301506 |
| TU357636 | lncRNA | downstream | 1002586 | 3910640 ~ 3912283 (+) | False | LOC113539463 |
| TU357807 | lncRNA | downstream | 1010276 | 3918330 ~ 3918531 (+) | True | G301792 |
| XM_026935730.2 | mRNA | upstream | 3101 | 2894838 ~ 2903607 (+) | True | hmces |
| XM_026935728.2 | mRNA | upstream | 3101 | 2894994 ~ 2903607 (+) | False | hmces |
| XM_026935731.2 | mRNA | upstream | 3101 | 2894995 ~ 2903607 (+) | False | hmces |
| XM_026935729.2 | mRNA | upstream | 3101 | 2895015 ~ 2903607 (+) | False | hmces |
| XM_026935727.2 | mRNA | upstream | 3101 | 2895078 ~ 2903607 (+) | False | hmces |
| XM_026935408.2 | mRNA | downstream | 17079 | 2925133 ~ 2941266 (+) | True | tmf1 |
| XM_026935409.2 | mRNA | downstream | 17079 | 2925133 ~ 2941266 (+) | False | tmf1 |
| XM_034314416.1 | mRNA | downstream | 33803 | 2941857 ~ 2958705 (+) | True | eogt |
| XM_034314415.1 | mRNA | downstream | 33803 | 2941857 ~ 2958705 (+) | False | eogt |
| XM_026935664.2 | mRNA | downstream | 57310 | 2965364 ~ 3013692 (+) | True | tafa4b |
| TU355411 | other | upstream | 1408221 | 1496860 ~ 1498487 (+) | False | LOC117599925 |
| TU355413 | other | upstream | 1409081 | 1496860 ~ 1497627 (+) | False | LOC117599925 |
| TU355179 | other | upstream | 2041820 | 863338 ~ 864888 (+) | False | fbxo42 |
| TU355161 | other | upstream | 2061897 | 842980 ~ 844811 (+) | False | LOC113539702 |
| XR_004580271.1 | other | upstream | 2385821 | 518567 ~ 520887 (+) | False | cdkn1a |
| TU358141 | other | downstream | 1559023 | 4467077 ~ 4469174 (+) | False | LOC113539599 |
| XR_003403967.2 | other | downstream | 3756020 | 6664074 ~ 6779358 (+) | False | cpne5b |
| XR_004580199.1 | other | downstream | 5593584 | 8501638 ~ 8558911 (+) | False | nfasca |
| XR_004580200.1 | other | downstream | 5593584 | 8501638 ~ 8558788 (+) | False | nfasca |
| TU362120 | other | downstream | 7604617 | 10512671 ~ 10513270 (+) | True | G305515 |
