Item | Value |
---|---|
RNA id | TU356705 |
length | 178 |
lncRNA type | sense_over |
GC content | 0.31 |
exon number | 1 |
gene id | LOC113539549 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_047614.1 |
NCBI id | CM018560.1 |
chromosome length | 21552800 |
location | 2715662 ~ 2723581 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
species | striped catfish (Pangasianodon hypophthalmus) |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TU356707 | lncRNA | upstream | 6322 | 2716700 ~ 2717082 (+) | True | G300838 |
TU356696 | lncRNA | upstream | 47034 | 2674367 ~ 2676370 (+) | True | G300827 |
TU356581 | lncRNA | upstream | 205199 | 2436366 ~ 2518205 (+) | False | G300723 |
TU356582 | lncRNA | upstream | 205199 | 2516745 ~ 2518205 (+) | True | G300723 |
XR_003403944.2 | lncRNA | upstream | 336303 | 2375972 ~ 2387101 (+) | True | LOC113539650 |
TU356706 | lncRNA | downstream | 1407 | 2724988 ~ 2725736 (+) | True | G300837 |
TU356708 | lncRNA | downstream | 2683 | 2726264 ~ 2726592 (+) | True | G300839 |
TU356709 | lncRNA | downstream | 3723 | 2727304 ~ 2727511 (+) | True | G300840 |
TU356710 | lncRNA | downstream | 4903 | 2728484 ~ 2729607 (+) | True | G300841 |
TU356712 | lncRNA | downstream | 11455 | 2735036 ~ 2736007 (+) | True | G300842 |
XM_026935356.2 | mRNA | upstream | 9253 | 2704703 ~ 2714151 (+) | True | atxn7l2a |
XM_026935357.2 | mRNA | upstream | 9253 | 2704704 ~ 2714151 (+) | False | atxn7l2a |
XM_026935392.2 | mRNA | upstream | 26437 | 2684049 ~ 2696967 (+) | True | sypl2a |
XM_026935565.2 | mRNA | upstream | 82081 | 2635314 ~ 2641323 (+) | True | zgc:172270 |
XM_034314063.1 | mRNA | upstream | 93683 | 2625147 ~ 2629721 (+) | False | si:ch211-213o11.11 |
XM_026935604.2 | mRNA | downstream | 31195 | 2754776 ~ 2761167 (+) | True | ldlrad2 |
XM_026935236.2 | mRNA | downstream | 40081 | 2763662 ~ 2766405 (+) | True | chchd4a |
XM_034314451.1 | mRNA | downstream | 63304 | 2786885 ~ 2827062 (+) | True | dnah1 |
XM_026935705.2 | mRNA | downstream | 104307 | 2827888 ~ 2852258 (+) | False | mapkapk3 |
XM_026935704.2 | mRNA | downstream | 104308 | 2827889 ~ 2852258 (+) | True | mapkapk3 |
TU355411 | other | upstream | 1224917 | 1496860 ~ 1498487 (+) | False | LOC117599925 |
TU355413 | other | upstream | 1225777 | 1496860 ~ 1497627 (+) | False | LOC117599925 |
TU355179 | other | upstream | 1858516 | 863338 ~ 864888 (+) | False | fbxo42 |
TU355161 | other | upstream | 1878593 | 842980 ~ 844811 (+) | False | LOC113539702 |
XR_004580271.1 | other | upstream | 2202517 | 518567 ~ 520887 (+) | False | cdkn1a |
TU358141 | other | downstream | 1743496 | 4467077 ~ 4469174 (+) | False | LOC113539599 |
XR_003403967.2 | other | downstream | 3940493 | 6664074 ~ 6779358 (+) | False | cpne5b |
XR_004580199.1 | other | downstream | 5778057 | 8501638 ~ 8558911 (+) | False | nfasca |
XR_004580200.1 | other | downstream | 5778057 | 8501638 ~ 8558788 (+) | False | nfasca |
TU362120 | other | downstream | 7789090 | 10512671 ~ 10513270 (+) | True | G305515 |