Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU357911 |
| length | 286 |
| lncRNA type | sense_over |
| GC content | 0.59 |
| exon number | 2 |
| gene id | G301885 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 4138782 ~ 4168646 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU357872 | lncRNA | upstream | 94916 | 4043090 ~ 4043866 (+) | True | G301857 |
| TU357867 | lncRNA | upstream | 109512 | 4029009 ~ 4029270 (+) | True | G301852 |
| TU357820 | lncRNA | upstream | 205432 | 3933107 ~ 3933350 (+) | True | G301805 |
| TU357807 | lncRNA | upstream | 220251 | 3918330 ~ 3918531 (+) | True | G301792 |
| TU357636 | lncRNA | upstream | 226499 | 3910640 ~ 3912283 (+) | False | LOC113539463 |
| TU357907 | lncRNA | downstream | 103450 | 4272096 ~ 4278649 (+) | False | cadpsa |
| TU357949 | lncRNA | downstream | 125821 | 4294467 ~ 4294733 (+) | True | G301921 |
| TU357951 | lncRNA | downstream | 126662 | 4295308 ~ 4295516 (+) | True | G301923 |
| TU358359 | lncRNA | downstream | 563507 | 4732153 ~ 4733061 (+) | True | G302281 |
| TU358451 | lncRNA | downstream | 652046 | 4820692 ~ 4820899 (+) | True | G302360 |
| XM_034314052.1 | mRNA | upstream | 53767 | 4080436 ~ 4085015 (+) | True | thoc7 |
| XM_026935169.2 | mRNA | upstream | 96690 | 4037772 ~ 4042092 (+) | True | psmd6 |
| XM_026935718.2 | mRNA | upstream | 127014 | 3964667 ~ 4011768 (+) | False | prickle2b |
| XM_026935677.2 | mRNA | downstream | 120926 | 4289572 ~ 4292368 (+) | True | fezf2 |
| XM_034314381.1 | mRNA | downstream | 121112 | 4289758 ~ 4292368 (+) | False | fezf2 |
| XM_034314204.1 | mRNA | downstream | 165519 | 4334165 ~ 4380659 (+) | True | fgd5a |
| XM_026935399.2 | mRNA | downstream | 221706 | 4390352 ~ 4418766 (+) | True | prkcdb |
| XM_026935400.2 | mRNA | downstream | 221706 | 4390352 ~ 4418766 (+) | False | prkcdb |
| TU355411 | other | upstream | 2640295 | 1496860 ~ 1498487 (+) | False | LOC117599925 |
| TU355413 | other | upstream | 2641155 | 1496860 ~ 1497627 (+) | False | LOC117599925 |
| TU355179 | other | upstream | 3273894 | 863338 ~ 864888 (+) | False | fbxo42 |
| TU355161 | other | upstream | 3293971 | 842980 ~ 844811 (+) | False | LOC113539702 |
| XR_004580271.1 | other | upstream | 3617895 | 518567 ~ 520887 (+) | False | cdkn1a |
| TU358141 | other | downstream | 298431 | 4467077 ~ 4469174 (+) | False | LOC113539599 |
| XR_003403967.2 | other | downstream | 2495428 | 6664074 ~ 6779358 (+) | False | cpne5b |
| XR_004580199.1 | other | downstream | 4332992 | 8501638 ~ 8558911 (+) | False | nfasca |
| XR_004580200.1 | other | downstream | 4332992 | 8501638 ~ 8558788 (+) | False | nfasca |
| TU362120 | other | downstream | 6344025 | 10512671 ~ 10513270 (+) | True | G305515 |
