Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU360208 |
| length | 938 |
| lncRNA type | sense_over |
| GC content | 0.36 |
| exon number | 2 |
| gene id | G303892 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 7437455 ~ 7448739 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU360205 | lncRNA | upstream | 16877 | 7415415 ~ 7420578 (+) | True | G303889 |
| TU360102 | lncRNA | upstream | 331926 | 7101770 ~ 7105529 (+) | True | G303806 |
| TU360012 | lncRNA | upstream | 436343 | 6994845 ~ 7001112 (+) | True | LOC113539683 |
| XR_003403952.2 | lncRNA | upstream | 436374 | 6996073 ~ 7001081 (+) | False | LOC113539683 |
| TU359932 | lncRNA | upstream | 536925 | 6898490 ~ 6900530 (+) | True | G303658 |
| TU360300 | lncRNA | downstream | 255477 | 7704216 ~ 7705243 (+) | True | G303966 |
| TU360545 | lncRNA | downstream | 454616 | 7903355 ~ 7903564 (+) | True | G304193 |
| TU360554 | lncRNA | downstream | 525887 | 7974626 ~ 7983380 (+) | False | lrrn2 |
| TU360645 | lncRNA | downstream | 711942 | 8160681 ~ 8191673 (+) | True | G304286 |
| TU360648 | lncRNA | downstream | 713060 | 8161799 ~ 8165909 (+) | True | G304289 |
| XM_026935653.2 | mRNA | upstream | 219084 | 7213709 ~ 7218371 (+) | False | fam72a |
| XM_034314028.1 | mRNA | downstream | 101047 | 7549786 ~ 7593458 (+) | True | mdfi |
| XM_026935267.2 | mRNA | downstream | 101141 | 7549880 ~ 7593458 (+) | False | mdfi |
| XM_026935544.2 | mRNA | downstream | 257489 | 7706228 ~ 7834194 (+) | True | ppfia4 |
| XM_026935545.2 | mRNA | downstream | 257489 | 7706228 ~ 7834194 (+) | False | ppfia4 |
| XM_026935549.2 | mRNA | downstream | 257489 | 7706228 ~ 7834194 (+) | False | ppfia4 |
| XR_003403967.2 | other | upstream | 658097 | 6664074 ~ 6779358 (+) | False | cpne5b |
| TU358141 | other | upstream | 2968281 | 4467077 ~ 4469174 (+) | False | LOC113539599 |
| TU355411 | other | upstream | 5938968 | 1496860 ~ 1498487 (+) | False | LOC117599925 |
| TU355413 | other | upstream | 5939828 | 1496860 ~ 1497627 (+) | False | LOC117599925 |
| TU355179 | other | upstream | 6572567 | 863338 ~ 864888 (+) | False | fbxo42 |
| XR_004580199.1 | other | downstream | 1052899 | 8501638 ~ 8558911 (+) | False | nfasca |
| XR_004580200.1 | other | downstream | 1052899 | 8501638 ~ 8558788 (+) | False | nfasca |
| TU362120 | other | downstream | 3063932 | 10512671 ~ 10513270 (+) | True | G305515 |
| XR_004580251.1 | other | downstream | 3315535 | 10764274 ~ 10773442 (+) | False | LOC113539694 |
| XR_003403954.2 | other | downstream | 3319968 | 10768707 ~ 10773442 (+) | False | LOC113539694 |
