Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU360834 |
| length | 213 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G304453 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 8480377 ~ 8480589 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU360831 | lncRNA | upstream | 8063 | 8472084 ~ 8472314 (+) | True | G304450 |
| TU360730 | lncRNA | upstream | 78244 | 8394722 ~ 8402133 (+) | True | G304367 |
| TU360731 | lncRNA | upstream | 78244 | 8399071 ~ 8402133 (+) | False | G304367 |
| TU360658 | lncRNA | upstream | 262242 | 8217868 ~ 8218135 (+) | True | G304299 |
| TU360645 | lncRNA | upstream | 288704 | 8160681 ~ 8191673 (+) | True | G304286 |
| XR_004580236.1 | lncRNA | downstream | 189049 | 8669638 ~ 8671697 (+) | True | LOC117599908 |
| TU360968 | lncRNA | downstream | 208904 | 8689493 ~ 8689709 (+) | True | G304566 |
| TU360977 | lncRNA | downstream | 237635 | 8718224 ~ 8718463 (+) | True | G304575 |
| TU361008 | lncRNA | downstream | 276009 | 8756598 ~ 8761643 (+) | True | G304599 |
| TU361011 | lncRNA | downstream | 276009 | 8756598 ~ 8758550 (+) | False | G304599 |
| XM_026935269.2 | mRNA | upstream | 219714 | 8250525 ~ 8260663 (+) | True | csf1a |
| XM_026935270.2 | mRNA | upstream | 219714 | 8250538 ~ 8260663 (+) | False | csf1a |
| XM_026935175.2 | mRNA | upstream | 453448 | 7974591 ~ 8026929 (+) | True | lrrn2 |
| XM_034313980.1 | mRNA | upstream | 453448 | 7975518 ~ 8026929 (+) | False | lrrn2 |
| XM_026935600.2 | mRNA | upstream | 583634 | 7855844 ~ 7896743 (+) | True | si:ch211-86h15.1 |
| XM_026935247.2 | mRNA | downstream | 506 | 8481095 ~ 8561702 (+) | False | nfasca |
| XM_026935249.2 | mRNA | downstream | 506 | 8481095 ~ 8561702 (+) | False | nfasca |
| XM_034314089.1 | mRNA | downstream | 21049 | 8501638 ~ 8561702 (+) | False | nfasca |
| XM_026935248.2 | mRNA | downstream | 21050 | 8501639 ~ 8561702 (+) | True | nfasca |
| XM_034314088.1 | mRNA | downstream | 21050 | 8501639 ~ 8561702 (+) | False | nfasca |
| XR_003403967.2 | other | upstream | 1701019 | 6664074 ~ 6779358 (+) | False | cpne5b |
| TU358141 | other | upstream | 4011203 | 4467077 ~ 4469174 (+) | False | LOC113539599 |
| TU355411 | other | upstream | 6981890 | 1496860 ~ 1498487 (+) | False | LOC117599925 |
| TU355413 | other | upstream | 6982750 | 1496860 ~ 1497627 (+) | False | LOC117599925 |
| TU355179 | other | upstream | 7615489 | 863338 ~ 864888 (+) | False | fbxo42 |
| XR_004580199.1 | other | downstream | 21049 | 8501638 ~ 8558911 (+) | False | nfasca |
| XR_004580200.1 | other | downstream | 21049 | 8501638 ~ 8558788 (+) | False | nfasca |
| TU362120 | other | downstream | 2032082 | 10512671 ~ 10513270 (+) | True | G305515 |
| XR_004580251.1 | other | downstream | 2283685 | 10764274 ~ 10773442 (+) | False | LOC113539694 |
| XR_003403954.2 | other | downstream | 2288118 | 10768707 ~ 10773442 (+) | False | LOC113539694 |
