Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU362120 |
| length | 600 |
| RNA type | TUCP |
| GC content | 0.46 |
| exon number | 1 |
| gene id | G305515 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 10512671 ~ 10513270 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_004580263.1 | lncRNA | upstream | 1236 | 10490551 ~ 10511435 (+) | False | LOC113539715 |
| XR_004580264.1 | lncRNA | upstream | 1236 | 10490568 ~ 10511435 (+) | False | LOC113539715 |
| XR_003403958.2 | lncRNA | upstream | 1236 | 10502296 ~ 10511435 (+) | True | LOC113539715 |
| TU362108 | lncRNA | upstream | 1273 | 10485454 ~ 10511398 (+) | False | LOC113539715 |
| TU362106 | lncRNA | upstream | 1273 | 10490763 ~ 10511398 (+) | False | LOC113539715 |
| TU362122 | lncRNA | downstream | 4014 | 10517284 ~ 10517562 (+) | True | G305517 |
| TU362127 | lncRNA | downstream | 10830 | 10524100 ~ 10524549 (+) | True | G305522 |
| TU362178 | lncRNA | downstream | 28041 | 10541311 ~ 10541532 (+) | True | G305568 |
| TU362193 | lncRNA | downstream | 128996 | 10642266 ~ 10664214 (+) | True | G305583 |
| TU362194 | lncRNA | downstream | 153927 | 10667197 ~ 10672574 (+) | True | G305584 |
| XM_026935543.2 | mRNA | upstream | 222856 | 10280520 ~ 10289815 (+) | False | mon1bb |
| XM_026935542.2 | mRNA | upstream | 222856 | 10280536 ~ 10289815 (+) | True | mon1bb |
| XM_034314339.1 | mRNA | upstream | 222856 | 10280536 ~ 10289815 (+) | False | mon1bb |
| XM_026935605.2 | mRNA | upstream | 373785 | 10102314 ~ 10138886 (+) | True | gnl3l |
| XM_026935383.2 | mRNA | upstream | 413149 | 10095530 ~ 10099522 (+) | True | LOC113539559 |
| XM_026935673.2 | mRNA | downstream | 255437 | 10768707 ~ 10773442 (+) | True | LOC113539694 |
| XM_026932796.2 | mRNA | downstream | 547738 | 11061008 ~ 11064101 (+) | True | ppcs |
| XM_026932797.2 | mRNA | downstream | 547742 | 11061012 ~ 11064101 (+) | False | ppcs |
| XM_026932795.2 | mRNA | downstream | 547934 | 11061204 ~ 11064101 (+) | False | ppcs |
| XM_034314395.1 | mRNA | downstream | 565790 | 11079060 ~ 11107165 (+) | False | cpne1 |
| XR_004580199.1 | other | upstream | 1953760 | 8501638 ~ 8558911 (+) | False | nfasca |
| XR_004580200.1 | other | upstream | 1953883 | 8501638 ~ 8558788 (+) | False | nfasca |
| XR_003403967.2 | other | upstream | 3733313 | 6664074 ~ 6779358 (+) | False | cpne5b |
| TU358141 | other | upstream | 6043497 | 4467077 ~ 4469174 (+) | False | LOC113539599 |
| TU355411 | other | upstream | 9014184 | 1496860 ~ 1498487 (+) | False | LOC117599925 |
| XR_004580251.1 | other | downstream | 251004 | 10764274 ~ 10773442 (+) | False | LOC113539694 |
| XR_003403954.2 | other | downstream | 255437 | 10768707 ~ 10773442 (+) | False | LOC113539694 |
| XR_004580252.1 | other | downstream | 255437 | 10768707 ~ 10773442 (+) | False | LOC113539694 |
| TU362376 | other | downstream | 598469 | 11111739 ~ 11112518 (+) | True | G305727 |
| TU362445 | other | downstream | 655189 | 11168459 ~ 11178473 (+) | False | unm_sa1614 |
