Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU362383 |
| length | 200 |
| lncRNA type | intronic |
| GC content | 0.35 |
| exon number | 1 |
| gene id | G305734 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 11129288 ~ 11129487 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_003403810.2 | lncRNA | upstream | 53698 | 11073762 ~ 11075590 (+) | True | LOC113538022 |
| TU362371 | lncRNA | upstream | 53745 | 11073895 ~ 11075543 (+) | False | LOC113538022 |
| TU362373 | lncRNA | upstream | 53745 | 11073895 ~ 11075543 (+) | False | LOC113538022 |
| TU362259 | lncRNA | upstream | 329057 | 10797969 ~ 10800231 (+) | False | G305642 |
| TU362260 | lncRNA | upstream | 330160 | 10797969 ~ 10799128 (+) | True | G305642 |
| TU362384 | lncRNA | downstream | 5028 | 11134515 ~ 11134724 (+) | True | G305735 |
| TU362514 | lncRNA | downstream | 144098 | 11273585 ~ 11275616 (+) | True | G305849 |
| TU362498 | lncRNA | downstream | 168835 | 11298322 ~ 11300713 (+) | True | G305833 |
| TU362499 | lncRNA | downstream | 173803 | 11303290 ~ 11304633 (+) | True | G305834 |
| TU362533 | lncRNA | downstream | 181383 | 11310870 ~ 11312417 (+) | True | G305865 |
| XM_034314395.1 | mRNA | upstream | 22123 | 11079060 ~ 11107165 (+) | False | cpne1 |
| XM_034314396.1 | mRNA | upstream | 22123 | 11079070 ~ 11107165 (+) | False | cpne1 |
| XM_034314393.1 | mRNA | upstream | 22123 | 11079070 ~ 11107165 (+) | True | cpne1 |
| XM_034314394.1 | mRNA | upstream | 22123 | 11092258 ~ 11107165 (+) | False | cpne1 |
| XM_026932791.2 | mRNA | upstream | 42595 | 11079081 ~ 11086693 (+) | True | rbm12 |
| XM_026932893.2 | mRNA | downstream | 11749 | 11141236 ~ 11178126 (+) | True | unm_sa1614 |
| XM_026932895.2 | mRNA | downstream | 11749 | 11141236 ~ 11178126 (+) | False | unm_sa1614 |
| XM_034314494.1 | mRNA | downstream | 85265 | 11214752 ~ 11221540 (+) | True | dynlrb1 |
| XM_026932973.2 | mRNA | downstream | 85507 | 11214994 ~ 11221540 (+) | False | dynlrb1 |
| XM_026932751.2 | mRNA | downstream | 94661 | 11224148 ~ 11235261 (+) | True | map1lc3a |
| TU362376 | other | upstream | 16770 | 11111739 ~ 11112518 (+) | True | G305727 |
| XR_004580251.1 | other | upstream | 355846 | 10764274 ~ 10773442 (+) | False | LOC113539694 |
| XR_003403954.2 | other | upstream | 355846 | 10768707 ~ 10773442 (+) | False | LOC113539694 |
| XR_004580252.1 | other | upstream | 355846 | 10768707 ~ 10773442 (+) | False | LOC113539694 |
| TU362120 | other | upstream | 616018 | 10512671 ~ 10513270 (+) | True | G305515 |
| TU362445 | other | downstream | 38972 | 11168459 ~ 11178473 (+) | False | unm_sa1614 |
| TU362496 | other | downstream | 85528 | 11215015 ~ 11221515 (+) | False | dynlrb1 |
| TU362531 | other | downstream | 184697 | 11314184 ~ 11315436 (+) | True | G305863 |
| TU362537 | other | downstream | 196117 | 11325604 ~ 11326360 (+) | True | G305869 |
| TU362623 | other | downstream | 351182 | 11480669 ~ 11481100 (+) | True | G305955 |
