Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU362985 |
| length | 259 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G306300 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 11942035 ~ 11942293 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU362980 | lncRNA | upstream | 4624 | 11937184 ~ 11937411 (+) | True | G306295 |
| TU362975 | lncRNA | upstream | 11834 | 11929712 ~ 11930201 (+) | True | G306290 |
| TU362971 | lncRNA | upstream | 16602 | 11924861 ~ 11925433 (+) | True | G306286 |
| TU362969 | lncRNA | upstream | 19359 | 11922469 ~ 11922676 (+) | True | G306284 |
| XR_004580179.1 | lncRNA | upstream | 98430 | 11837338 ~ 11843605 (+) | True | LOC113537887 |
| TU363147 | lncRNA | downstream | 201255 | 12143548 ~ 12152169 (+) | True | G306432 |
| TU363151 | lncRNA | downstream | 212002 | 12154295 ~ 12154550 (+) | True | G306433 |
| TU363175 | lncRNA | downstream | 342658 | 12284951 ~ 12289757 (+) | True | G306452 |
| TU363193 | lncRNA | downstream | 353076 | 12295369 ~ 12295729 (+) | True | G306470 |
| TU363205 | lncRNA | downstream | 494906 | 12437199 ~ 12448374 (+) | True | G306479 |
| XM_026932863.2 | mRNA | upstream | 144601 | 11794011 ~ 11797434 (+) | True | barx1 |
| XM_026932864.2 | mRNA | upstream | 144601 | 11794017 ~ 11797434 (+) | False | barx1 |
| XM_034314327.1 | mRNA | upstream | 270576 | 11608923 ~ 11671459 (+) | True | fbln2 |
| XM_026932911.2 | mRNA | downstream | 125331 | 12067624 ~ 12096756 (+) | True | alpl |
| XM_026932486.2 | mRNA | downstream | 234797 | 12177090 ~ 12185144 (+) | True | nmur3 |
| XM_026932640.2 | mRNA | downstream | 323412 | 12265705 ~ 12413095 (+) | True | ephb2b |
| XM_034314296.1 | mRNA | downstream | 323412 | 12265705 ~ 12413095 (+) | False | ephb2b |
| XM_034314297.1 | mRNA | downstream | 323412 | 12265705 ~ 12388743 (+) | False | ephb2b |
| TU362774 | other | upstream | 426222 | 11515059 ~ 11515813 (+) | True | G306103 |
| TU362623 | other | upstream | 460935 | 11480669 ~ 11481100 (+) | True | G305955 |
| TU362537 | other | upstream | 615675 | 11325604 ~ 11326360 (+) | True | G305869 |
| TU362531 | other | upstream | 626599 | 11314184 ~ 11315436 (+) | True | G305863 |
| TU362496 | other | upstream | 720520 | 11215015 ~ 11221515 (+) | False | dynlrb1 |
| TU363207 | other | downstream | 515308 | 12457601 ~ 12462536 (+) | True | G306480 |
| XR_004580240.1 | other | downstream | 2428495 | 14370788 ~ 14476385 (+) | False | asic1b |
| TU364869 | other | downstream | 2572317 | 14514610 ~ 14521147 (+) | False | gpd1b |
| XR_004580181.1 | other | downstream | 4547068 | 16489361 ~ 16501684 (+) | False | amigo3 |
| XR_004580182.1 | other | downstream | 4547068 | 16489361 ~ 16494139 (+) | False | amigo3 |
