Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU363232 |
| length | 1145 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G306503 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 12572422 ~ 12573759 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU363205 | lncRNA | upstream | 124048 | 12437199 ~ 12448374 (+) | True | G306479 |
| TU363193 | lncRNA | upstream | 276693 | 12295369 ~ 12295729 (+) | True | G306470 |
| TU363175 | lncRNA | upstream | 282665 | 12284951 ~ 12289757 (+) | True | G306452 |
| TU363151 | lncRNA | upstream | 417872 | 12154295 ~ 12154550 (+) | True | G306433 |
| TU363147 | lncRNA | upstream | 420253 | 12143548 ~ 12152169 (+) | True | G306432 |
| TU363513 | lncRNA | downstream | 223989 | 12797748 ~ 12797982 (+) | True | G306744 |
| TU363525 | lncRNA | downstream | 330449 | 12904208 ~ 12904841 (+) | True | G306756 |
| TU363733 | lncRNA | downstream | 622716 | 13196475 ~ 13283007 (+) | True | G306938 |
| TU363732 | lncRNA | downstream | 715030 | 13288789 ~ 13293439 (+) | True | G306937 |
| TU363757 | lncRNA | downstream | 757928 | 13331687 ~ 13334245 (+) | True | G306959 |
| XM_026932943.2 | mRNA | upstream | 9681 | 12533236 ~ 12562741 (+) | True | LOC113538096 |
| XM_026932942.2 | mRNA | upstream | 10193 | 12533239 ~ 12562229 (+) | False | LOC113538096 |
| XM_034314397.1 | mRNA | upstream | 45144 | 12496309 ~ 12527278 (+) | True | timeless |
| XM_026932900.2 | mRNA | upstream | 45144 | 12496309 ~ 12527278 (+) | False | timeless |
| XM_026932892.2 | mRNA | upstream | 86447 | 12474056 ~ 12485975 (+) | True | prph |
| XM_026932786.2 | mRNA | downstream | 11366 | 12585125 ~ 12595797 (+) | True | pmela |
| XM_026932417.2 | mRNA | downstream | 25310 | 12599069 ~ 12606053 (+) | True | cdk2 |
| XM_026932919.2 | mRNA | downstream | 34594 | 12608353 ~ 12626608 (+) | True | sarnp |
| XM_026932714.2 | mRNA | downstream | 120527 | 12694286 ~ 12775144 (+) | True | iars1 |
| XM_026932434.2 | mRNA | downstream | 215733 | 12789492 ~ 12956445 (+) | False | atp2b2 |
| TU363207 | other | upstream | 109886 | 12457601 ~ 12462536 (+) | True | G306480 |
| TU362774 | other | upstream | 1056609 | 11515059 ~ 11515813 (+) | True | G306103 |
| TU362623 | other | upstream | 1091322 | 11480669 ~ 11481100 (+) | True | G305955 |
| TU362537 | other | upstream | 1246062 | 11325604 ~ 11326360 (+) | True | G305869 |
| TU362531 | other | upstream | 1256986 | 11314184 ~ 11315436 (+) | True | G305863 |
| XR_004580240.1 | other | downstream | 1797029 | 14370788 ~ 14476385 (+) | False | asic1b |
| TU364869 | other | downstream | 1940851 | 14514610 ~ 14521147 (+) | False | gpd1b |
| XR_004580181.1 | other | downstream | 3915602 | 16489361 ~ 16501684 (+) | False | amigo3 |
| XR_004580182.1 | other | downstream | 3915602 | 16489361 ~ 16494139 (+) | False | amigo3 |
| TU366607 | other | downstream | 4687220 | 17260979 ~ 17263663 (+) | True | LOC113537865 |
