Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU363513 |
| length | 215 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 2 |
| gene id | G306744 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 12797748 ~ 12797982 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| id | name | namespace |
|---|---|---|
| GO:0046982 | protein heterodimerization activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU363232 | lncRNA | upstream | 223989 | 12572422 ~ 12573759 (+) | True | G306503 |
| TU363205 | lncRNA | upstream | 349374 | 12437199 ~ 12448374 (+) | True | G306479 |
| TU363193 | lncRNA | upstream | 502019 | 12295369 ~ 12295729 (+) | True | G306470 |
| TU363175 | lncRNA | upstream | 507991 | 12284951 ~ 12289757 (+) | True | G306452 |
| TU363151 | lncRNA | upstream | 643198 | 12154295 ~ 12154550 (+) | True | G306433 |
| TU363525 | lncRNA | downstream | 106226 | 12904208 ~ 12904841 (+) | True | G306756 |
| TU363733 | lncRNA | downstream | 398493 | 13196475 ~ 13283007 (+) | True | G306938 |
| TU363732 | lncRNA | downstream | 490807 | 13288789 ~ 13293439 (+) | True | G306937 |
| TU363757 | lncRNA | downstream | 533705 | 13331687 ~ 13334245 (+) | True | G306959 |
| TU363759 | lncRNA | downstream | 534824 | 13332806 ~ 13333248 (+) | True | G306961 |
| XM_026932714.2 | mRNA | upstream | 22604 | 12694286 ~ 12775144 (+) | True | iars1 |
| XM_026932919.2 | mRNA | upstream | 171140 | 12608353 ~ 12626608 (+) | True | sarnp |
| XM_026932417.2 | mRNA | upstream | 191695 | 12599069 ~ 12606053 (+) | True | cdk2 |
| XM_026932786.2 | mRNA | upstream | 201951 | 12585125 ~ 12595797 (+) | True | pmela |
| XM_026932943.2 | mRNA | upstream | 235007 | 12533236 ~ 12562741 (+) | True | LOC113538096 |
| XM_026932429.2 | mRNA | downstream | 50135 | 12848117 ~ 12959106 (+) | False | atp2b2 |
| XM_026932776.2 | mRNA | downstream | 177545 | 12975527 ~ 13011059 (+) | True | slc6a11b |
| XM_026932778.2 | mRNA | downstream | 262001 | 13059983 ~ 13073758 (+) | True | slc6a1b |
| XM_034314478.1 | mRNA | downstream | 262001 | 13059983 ~ 13071392 (+) | False | slc6a1b |
| XM_034314479.1 | mRNA | downstream | 262210 | 13060192 ~ 13071392 (+) | False | slc6a1b |
| TU363207 | other | upstream | 335212 | 12457601 ~ 12462536 (+) | True | G306480 |
| TU362774 | other | upstream | 1281935 | 11515059 ~ 11515813 (+) | True | G306103 |
| TU362623 | other | upstream | 1316648 | 11480669 ~ 11481100 (+) | True | G305955 |
| TU362537 | other | upstream | 1471388 | 11325604 ~ 11326360 (+) | True | G305869 |
| TU362531 | other | upstream | 1482312 | 11314184 ~ 11315436 (+) | True | G305863 |
| XR_004580240.1 | other | downstream | 1572806 | 14370788 ~ 14476385 (+) | False | asic1b |
| TU364869 | other | downstream | 1716628 | 14514610 ~ 14521147 (+) | False | gpd1b |
| XR_004580181.1 | other | downstream | 3691379 | 16489361 ~ 16501684 (+) | False | amigo3 |
| XR_004580182.1 | other | downstream | 3691379 | 16489361 ~ 16494139 (+) | False | amigo3 |
| TU366607 | other | downstream | 4462997 | 17260979 ~ 17263663 (+) | True | LOC113537865 |
