Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU363733 |
| length | 742 |
| lncRNA type | sense_over |
| GC content | 0.44 |
| exon number | 2 |
| gene id | G306938 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 13196475 ~ 13283007 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU363525 | lncRNA | upstream | 291634 | 12904208 ~ 12904841 (+) | True | G306756 |
| TU363513 | lncRNA | upstream | 398493 | 12797748 ~ 12797982 (+) | True | G306744 |
| TU363232 | lncRNA | upstream | 622716 | 12572422 ~ 12573759 (+) | True | G306503 |
| TU363205 | lncRNA | upstream | 748101 | 12437199 ~ 12448374 (+) | True | G306479 |
| TU363193 | lncRNA | upstream | 900746 | 12295369 ~ 12295729 (+) | True | G306470 |
| TU363732 | lncRNA | downstream | 5782 | 13288789 ~ 13293439 (+) | True | G306937 |
| TU363757 | lncRNA | downstream | 48680 | 13331687 ~ 13334245 (+) | True | G306959 |
| TU363759 | lncRNA | downstream | 49799 | 13332806 ~ 13333248 (+) | True | G306961 |
| TU363884 | lncRNA | downstream | 67446 | 13350453 ~ 13350680 (+) | True | G307079 |
| TU363969 | lncRNA | downstream | 218459 | 13501466 ~ 13501831 (+) | True | G307154 |
| XM_026932905.2 | mRNA | upstream | 34783 | 13140570 ~ 13161692 (+) | False | hrh1 |
| XM_034314385.1 | mRNA | upstream | 34783 | 13140721 ~ 13161692 (+) | False | hrh1 |
| XM_034314384.1 | mRNA | upstream | 34783 | 13147251 ~ 13161692 (+) | True | hrh1 |
| XM_026932778.2 | mRNA | upstream | 122717 | 13059983 ~ 13073758 (+) | True | slc6a1b |
| XM_034314478.1 | mRNA | upstream | 125083 | 13059983 ~ 13071392 (+) | False | slc6a1b |
| XM_026932625.2 | mRNA | downstream | 75917 | 13358924 ~ 13425482 (+) | True | syn2b |
| XM_026932671.2 | mRNA | downstream | 157652 | 13440659 ~ 13476589 (+) | True | pparg |
| XM_026932670.2 | mRNA | downstream | 165440 | 13448447 ~ 13476589 (+) | False | pparg |
| XM_026932669.2 | mRNA | downstream | 167356 | 13450363 ~ 13476589 (+) | False | pparg |
| XM_026932668.2 | mRNA | downstream | 170670 | 13453677 ~ 13476589 (+) | False | pparg |
| TU363207 | other | upstream | 733939 | 12457601 ~ 12462536 (+) | True | G306480 |
| TU362774 | other | upstream | 1680662 | 11515059 ~ 11515813 (+) | True | G306103 |
| TU362623 | other | upstream | 1715375 | 11480669 ~ 11481100 (+) | True | G305955 |
| TU362537 | other | upstream | 1870115 | 11325604 ~ 11326360 (+) | True | G305869 |
| TU362531 | other | upstream | 1881039 | 11314184 ~ 11315436 (+) | True | G305863 |
| XR_004580240.1 | other | downstream | 1087781 | 14370788 ~ 14476385 (+) | False | asic1b |
| TU364869 | other | downstream | 1231603 | 14514610 ~ 14521147 (+) | False | gpd1b |
| XR_004580181.1 | other | downstream | 3206354 | 16489361 ~ 16501684 (+) | False | amigo3 |
| XR_004580182.1 | other | downstream | 3206354 | 16489361 ~ 16494139 (+) | False | amigo3 |
| TU366607 | other | downstream | 3977972 | 17260979 ~ 17263663 (+) | True | LOC113537865 |
