Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU363969 |
| length | 366 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G307154 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_047614.1 |
| NCBI id | CM018560.1 |
| chromosome length | 21552800 |
| location | 13501466 ~ 13501831 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| species | striped catfish (Pangasianodon hypophthalmus) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU363884 | lncRNA | upstream | 150786 | 13350453 ~ 13350680 (+) | True | G307079 |
| TU363757 | lncRNA | upstream | 167221 | 13331687 ~ 13334245 (+) | True | G306959 |
| TU363759 | lncRNA | upstream | 168218 | 13332806 ~ 13333248 (+) | True | G306961 |
| TU363732 | lncRNA | upstream | 208027 | 13288789 ~ 13293439 (+) | True | G306937 |
| TU363733 | lncRNA | upstream | 218459 | 13196475 ~ 13283007 (+) | True | G306938 |
| TU363977 | lncRNA | downstream | 20178 | 13522009 ~ 13524054 (+) | True | G307161 |
| TU364036 | lncRNA | downstream | 189275 | 13691106 ~ 13692912 (+) | False | ippk |
| XR_004580226.1 | lncRNA | downstream | 438595 | 13940426 ~ 13960190 (+) | True | LOC117599900 |
| TU364104 | lncRNA | downstream | 501777 | 14003608 ~ 14003831 (+) | True | G307272 |
| TU364094 | lncRNA | downstream | 513331 | 14015162 ~ 14016394 (+) | True | G307262 |
| XM_026932920.2 | mRNA | upstream | 5481 | 13481411 ~ 13495985 (+) | True | tsen2 |
| XM_026932921.2 | mRNA | upstream | 5481 | 13481617 ~ 13495985 (+) | False | tsen2 |
| XM_026932671.2 | mRNA | upstream | 24877 | 13440659 ~ 13476589 (+) | True | pparg |
| XM_026932670.2 | mRNA | upstream | 24877 | 13448447 ~ 13476589 (+) | False | pparg |
| XM_026932669.2 | mRNA | upstream | 24877 | 13450363 ~ 13476589 (+) | False | pparg |
| XM_026932541.2 | mRNA | downstream | 6578 | 13508409 ~ 13521412 (+) | False | mkrn2 |
| XM_026932539.2 | mRNA | downstream | 6961 | 13508792 ~ 13521412 (+) | True | mkrn2 |
| XM_026932540.2 | mRNA | downstream | 6963 | 13508794 ~ 13521412 (+) | False | mkrn2 |
| XM_026932624.2 | mRNA | downstream | 63238 | 13565069 ~ 13568953 (+) | False | cnbpb |
| XM_034314274.1 | mRNA | downstream | 63412 | 13565243 ~ 13568961 (+) | True | cnbpb |
| TU363207 | other | upstream | 1038930 | 12457601 ~ 12462536 (+) | True | G306480 |
| TU362774 | other | upstream | 1985653 | 11515059 ~ 11515813 (+) | True | G306103 |
| TU362623 | other | upstream | 2020366 | 11480669 ~ 11481100 (+) | True | G305955 |
| TU362537 | other | upstream | 2175106 | 11325604 ~ 11326360 (+) | True | G305869 |
| TU362531 | other | upstream | 2186030 | 11314184 ~ 11315436 (+) | True | G305863 |
| XR_004580240.1 | other | downstream | 868957 | 14370788 ~ 14476385 (+) | False | asic1b |
| TU364869 | other | downstream | 1012779 | 14514610 ~ 14521147 (+) | False | gpd1b |
| XR_004580181.1 | other | downstream | 2987530 | 16489361 ~ 16501684 (+) | False | amigo3 |
| XR_004580182.1 | other | downstream | 2987530 | 16489361 ~ 16494139 (+) | False | amigo3 |
| TU366607 | other | downstream | 3759148 | 17260979 ~ 17263663 (+) | True | LOC113537865 |
